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Problematic FLIM file #5

grislis opened this issue Dec 5, 2013 · 1 comment


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commented Dec 5, 2013

Loading /Users/aivar/Desktop/ics/chris/Ils1 500 60slice.ics


Exception in thread "main" java.lang.ArrayIndexOutOfBoundsException: 0

at loci.slim.heuristics.FitterEstimator.findMax( at loci.slim.heuristics.FitterEstimator.getEstimateStartIndex( at loci.curvefitter.SLIMCurveFitter.fitData(

Needs to be investigated.

@ghost ghost assigned grislis Dec 5, 2013

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commented Dec 28, 2013

Getting the same issue in IJ2 version:

java.lang.ArrayIndexOutOfBoundsException: 0
at loci.slim2.heuristics.DefaultFitterEstimator.findMax(

This seems like an oddball file: No lifetime dimension is detected, so IJ2 version prompts to select a dimension, CHANNEL is the only choice. Still the image exhibits a regular pattern so it looks like it loads wrong:


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