Shareef Dabdoub smdabdoub

Pinned repositories

1. phylotoast

   Tools for phylogenetic data analysis including visualization and cluster-computing support.

   Python 11 2

2. kraken-biom

   Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWood/kraken).

   Python 9 6

3. PyMGRAST

   A python interface to the MG-RAST API including executable scripts providing higher level functionality.

   Python 3 1

4. find

   Flow Investigation using N-Dimensions (FIND) is a program designed for analysis and visualization of Flow Cytometry data. FIND focuses specifically on automated population discovery (clustering) me…

   Python 2 1

5. ProkaryMetrics

   Visualize and analyze 3D biofilm data from fluorescent micrographs

   Python 1

6. kraken

   Forked from DerrickWood/kraken

   Kraken taxonomic sequence classification system

   C++