From d29473b6d1fde0c1fd071abe0696379766f7028d Mon Sep 17 00:00:00 2001
From: Stevie Ped <stephen.pederson.au@gmail.com>
Date: Tue, 23 Jan 2024 01:45:55 +1030
Subject: [PATCH] Reran gitub actions

---
 .Rbuildignore |  1 +
 man/parY.Rd   | 43 -------------------------------------------
 2 files changed, 1 insertion(+), 43 deletions(-)
 delete mode 100644 man/parY.Rd

diff --git a/.Rbuildignore b/.Rbuildignore
index 3e7804a..8781da9 100644
--- a/.Rbuildignore
+++ b/.Rbuildignore
@@ -6,3 +6,4 @@
 ^pkgdown$
 ^TODO\.md$
 ^data-raw$
+^.github$
diff --git a/man/parY.Rd b/man/parY.Rd
deleted file mode 100644
index b973d2e..0000000
--- a/man/parY.Rd
+++ /dev/null
@@ -1,43 +0,0 @@
-% Generated by roxygen2: do not edit by hand
-% Please edit documentation in R/parY.R
-\name{parY}
-\alias{parY}
-\title{Get the PAR-Y Regions From a Seqinfo Object}
-\usage{
-parY(x, ...)
-}
-\arguments{
-\item{x}{A Seqinfo object}
-
-\item{...}{Not used}
-}
-\value{
-A GenomicRanges object
-}
-\description{
-Define the Pseudo-Autosomal Regions from a Seqinfo Object
-}
-\details{
-Using a seqinfo object based on either hg38, hg19, CHM13.v2 or their
-variations, create a GRanges object with the Pseudo-Autosomal Regions from
-the Y chromosome for that build.
-The length of the Y chromosome on the seqinfo object is used to determine
-the correct genome build
-
-An additional mcols column called PAR will indicate PAR1 and PAR2
-}
-\examples{
-library(GenomeInfoDb)
-sq <- Seqinfo(
-    seqnames = "chrY", seqlengths = 59373566, genome = "hg19_only_chrY"
-)
-parY(sq)
-
-## PAR regions for CHM13 are also available
-sq <- Seqinfo(
-    seqnames = "chrY", seqlengths = 62460029, genome = "CHM13"
-)
-parY(sq)
-
-
-}