diff --git a/config/config.yaml b/config/config.yaml index d50d4d83..c5d1aadd 100644 --- a/config/config.yaml +++ b/config/config.yaml @@ -83,7 +83,8 @@ enrichment: # if activated, you need to provide a GMT file with gene sets of interest gene_sets_file: "resources/gene_sets/dummy.gmt" fdr_gene_set: 0.05 - eps: 0.0 + # minimum achievable p-value (equivalent to the reciprocal of the number of permutations, see fgsea docs) + eps: 1e-50 spia: # tool is only run if set to `true` activate: false