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Fix unpackdb parameter
1 parent be8c278 commit 92deb92

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3 files changed

+8
-1
lines changed

3 files changed

+8
-1
lines changed

src/MMseqsBase.cpp

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -722,7 +722,7 @@ std::vector<Command> baseCommands = {
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"<i:srcDB> <o:dstDB>",
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CITATION_MMSEQS2, {{"DB", DbType::ACCESS_MODE_INPUT, DbType::NEED_DATA, NULL },
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{"DB", DbType::ACCESS_MODE_OUTPUT, DbType::NEED_DATA, &DbValidator::allDb }}},
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{"unpackdb", unpackdb, &par.onlyverbosity, COMMAND_STORAGE,
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{"unpackdb", unpackdb, &par.unpackdbs, COMMAND_STORAGE,
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"Unpack a DB into separate files",
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NULL,
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"Milot Mirdita <milot@mirdita.de>",

src/commons/Parameters.cpp

Lines changed: 6 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -1317,6 +1317,12 @@ Parameters::Parameters():
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tar2db.push_back(&PARAM_THREADS);
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tar2db.push_back(&PARAM_V);
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// unpackdb
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unpackdbs.push_back(&PARAM_UNPACK_NAME_MODE);
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unpackdbs.push_back(&PARAM_UNPACK_SUFFIX);
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unpackdbs.push_back(&PARAM_THREADS);
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unpackdbs.push_back(&PARAM_V);
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// appenddbtoindex
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appenddbtoindex.push_back(&PARAM_ID_LIST);
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appenddbtoindex.push_back(&PARAM_V);

src/commons/Parameters.h

Lines changed: 1 addition & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -1113,6 +1113,7 @@ class Parameters {
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std::vector<MMseqsParameter*> enrichworkflow;
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std::vector<MMseqsParameter*> databases;
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std::vector<MMseqsParameter*> tar2db;
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std::vector<MMseqsParameter*> unpackdbs;
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std::vector<MMseqsParameter*> appenddbtoindex;
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std::vector<MMseqsParameter*> combineList(const std::vector<MMseqsParameter*> &par1,

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