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Branch: master
Commits on Jun 21, 2019
  1. fix crassh of AtRanks for nodes with no rank

    elileka committed Jun 21, 2019
Commits on Jun 18, 2019
  1. new mode SORT_BY_OFFSET doesn't sort ids. swapresults uses it to save…

    elileka committed Jun 18, 2019
    … memory.
Commits on Jun 12, 2019
  1. fix

    elileka committed Jun 12, 2019
  2. append ByteParser unit only if not 0. use Format to prepare parameter…

    elileka committed Jun 12, 2019
    … string to support programs that use mmseqs2 as a submodule
Commits on Jun 11, 2019
  1. fix ByteParser parameter regex

    elileka committed Jun 11, 2019
  2. return available disk space in bytes

    elileka committed Jun 11, 2019
Commits on Jun 10, 2019
  1. too few splits error turned to warning

    elileka committed Jun 10, 2019
Commits on Jun 7, 2019
  1. move more split logic to setupSplit, clean up setupSplit and consider…

    elileka committed Jun 7, 2019
    … the number of sequences in db to be splitted
  2. represent 1024 as size_t

    elileka committed Jun 7, 2019
  3. Merge branch 'master' of github.com:soedinglab/MMseqs2

    elileka committed Jun 7, 2019
  4. Fix #193. Byte typed parmeters are now all consistently given in mega…

    elileka committed Jun 7, 2019
    … byte or suffixed with the correct SI unit (B, K, M, G, T).
Commits on Jun 3, 2019
  1. cleanup of merge functions to reduce code duplication

    elileka committed Jun 3, 2019
  2. mergeResultsNormal can deal with unmerged input

    elileka committed Jun 3, 2019
Commits on May 30, 2019
  1. remove useless file exists check

    elileka committed May 30, 2019
Commits on May 29, 2019
  1. call movedb in dbreader

    elileka committed May 29, 2019
  2. Whitespace

    elileka committed May 29, 2019
  3. Reorder template intialization to fix compile issue

    elileka committed May 29, 2019
  4. Fix consecutive mergeOutput calls breaking due to mis-order

    elileka committed May 29, 2019
Commits on May 22, 2019
  1. check existence by dbtype file to allow unmerged input

    elileka committed May 22, 2019
Commits on May 21, 2019
Commits on Apr 26, 2019
  1. copy and remove only if file exists

    elileka committed Apr 26, 2019
Commits on Apr 20, 2019
  1. rmdb of aln_merged to avoid conflict with unmerged dbs

    elileka committed Apr 20, 2019
Commits on Mar 26, 2019
  1. fixed rbh command details

    elileka committed Mar 26, 2019
  2. modified rbh to include equals

    elileka committed Mar 26, 2019
Commits on Mar 20, 2019
  1. fixed convert to uppercase to skip CHAR_MAX

    elileka committed Mar 20, 2019
Commits on Mar 14, 2019
  1. order_redundancy is not a db, rm to remove

    elileka committed Mar 14, 2019
Commits on Mar 7, 2019
  1. use rmdb for db cleanups in workflows

    elileka committed Mar 7, 2019
Commits on Mar 4, 2019
  1. module and workflow to detect reciprocal best hits.

    elileka committed Mar 4, 2019
Commits on Dec 13, 2018
  1. remove newline

    elileka committed Dec 13, 2018
Commits on Dec 12, 2018
  1. num threads is passed as parameter to dbwriter

    elileka committed Dec 12, 2018
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