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language: shell
os: linux
dist: xenial
addons:
apt:
packages: &default_packages
- cmake
- make
- zlib1g-dev
- libbz2-dev
- vim-common
- shellcheck
jobs:
include:
- addons:
apt:
packages:
- *default_packages
- build-essential
- g++-8
- gcc-8
arch: arm64
env: CC=gcc-8 CXX=g++-8 MMSEQS_NUM_THREADS=8
dist: bionic
- addons:
apt:
packages:
- *default_packages
- build-essential
- g++-8
- gcc-8
arch: ppc64le
dist: bionic
env: CC=gcc-8 CXX=g++-8 MMSEQS_NUM_THREADS=4
- addons:
apt:
packages:
- *default_packages
- clang-5.0
- libc++-dev
- libomp-dev
env: CC=clang-5.0 CXX=clang++-5.0
- addons:
apt:
sources:
- ubuntu-toolchain-r-test
packages:
- *default_packages
- gcc-4.9
- g++-4.9
env: CC=gcc-4.9 CXX=g++-4.9
before_install:
- export CC
- export CXX
script:
- |
if [[ -n "$MPI" ]]; then MPI=1; else MPI=0; fi; \
mkdir build; cd build; \
cmake -DHAVE_MPI="$MPI" ..;
make -j ${MMSEQS_NUM_THREADS:-$(nproc --all)}; \
cd ..; \
./util/run_regression.sh ./build/src/plass ./build/src/plass REGRESSION;