diff --git a/.github/workflows/deploy.yml b/.github/workflows/deploy.yml index 14c1d51..5c7966f 100644 --- a/.github/workflows/deploy.yml +++ b/.github/workflows/deploy.yml @@ -27,13 +27,13 @@ jobs: ./flask-restx/ ./flask-sentiment-analysis-api/ ./flask-sentiment-analysis-app/ - ./jupyter-static-visualization/ + ./jupyter-interactive-visualization/ ./jupyter-voila/ ./quarto-lightbox/ ./reticulated-image-classifier/ + ./reticulated-rmarkdown-notebook/ ./reticulated-sentiment-analysis-api/ ./reticulated-sentiment-analysis-app/ - ./rmarkdown-notebook/ ./shiny-income-share/ ./streamlit-income-share/ require-vanity-path: true diff --git a/README.md b/README.md index a7831ad..57b4239 100644 --- a/README.md +++ b/README.md @@ -36,7 +36,7 @@ This enables you to use models built in Python to power Shiny apps, visualize pa ### Documents -- [Visualizing pandas dataframes with ggplot2](./rmarkdown-notebook/README.md) +- [Visualizing pandas dataframes with ggplot2](./reticulated-rmarkdown-notebook/README.md) ## Getting Started diff --git a/flask-sentiment-analysis-api/manifest.json b/flask-sentiment-analysis-api/manifest.json index dafa1fc..95abe95 100644 --- a/flask-sentiment-analysis-api/manifest.json +++ b/flask-sentiment-analysis-api/manifest.json @@ -46,9 +46,6 @@ }, "model/vocab/vectors": { "checksum": "63fd11f249a725dee9c2941b339ea037" - }, - "reqs.txt": { - "checksum": "21b94d1e5f5897b22df1412cbe8b17ae" } } } diff --git a/rmarkdown-notebook/.gitignore b/reticulated-rmarkdown-notebook/.gitignore similarity index 100% rename from rmarkdown-notebook/.gitignore rename to reticulated-rmarkdown-notebook/.gitignore diff --git a/rmarkdown-notebook/README.md b/reticulated-rmarkdown-notebook/README.md similarity index 100% rename from rmarkdown-notebook/README.md rename to reticulated-rmarkdown-notebook/README.md diff --git a/reticulated-rmarkdown-notebook/manifest.json b/reticulated-rmarkdown-notebook/manifest.json new file mode 100644 index 0000000..85d5b55 --- /dev/null +++ b/reticulated-rmarkdown-notebook/manifest.json @@ -0,0 +1,2072 @@ +{ + "version": 1, + "locale": "en_US", + "platform": "4.2.0", + "metadata": { + "appmode": "rmd-static", + "primary_rmd": "rmarkdown-notebook.Rmd", + "primary_html": null, + "content_category": null, + "has_parameters": false + }, + "python": { + "version": "3.10.0", + "package_manager": { + "name": "pip", + "version": "23.0.1", + "package_file": "requirements.txt" + } + }, + "packages": { + "MASS": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "MASS", + "Priority": "recommended", + "Version": "7.3-58.3", + "Date": "2023-07-07", + "Revision": "$Rev: 3618 $", + "Depends": "R (>= 3.3.0), grDevices, graphics, stats, utils", + "Imports": "methods", + "Suggests": "lattice, nlme, nnet, survival", + "Authors@R": "c(person(\"Brian\", \"Ripley\", role = c(\"aut\", \"cre\", \"cph\"),\n email = \"ripley@stats.ox.ac.uk\"),\n\t person(\"Bill\", \"Venables\", role = \"ctb\"),\n\t person(c(\"Douglas\", \"M.\"), \"Bates\", role = \"ctb\"),\n\t person(\"Kurt\", \"Hornik\", role = \"trl\",\n comment = \"partial port ca 1998\"),\n\t person(\"Albrecht\", \"Gebhardt\", role = \"trl\",\n comment = \"partial port ca 1998\"),\n\t person(\"David\", \"Firth\", role = \"ctb\"))", + "Description": "Functions and datasets to support Venables and Ripley,\n \"Modern Applied Statistics with S\" (4th edition, 2002).", + "Title": "Support Functions and Datasets for Venables and Ripley's MASS", + "LazyData": "yes", + "ByteCompile": "yes", + "License": "GPL-2 | GPL-3", + "URL": "http://www.stats.ox.ac.uk/pub/MASS4/", + "Contact": "", + "NeedsCompilation": "yes", + "Packaged": "2023-03-07 08:06:36 UTC; ripley", + "Author": "Brian Ripley [aut, cre, cph],\n Bill Venables [ctb],\n Douglas M. Bates [ctb],\n Kurt Hornik [trl] (partial port ca 1998),\n Albrecht Gebhardt [trl] (partial port ca 1998),\n David Firth [ctb]", + "Maintainer": "Brian Ripley ", + "Repository": "CRAN", + "Date/Publication": "2023-03-07 09:23:19 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2023-03-08 12:53:52 UTC; unix", + "Archs": "MASS.so.dSYM" + } + }, + "Matrix": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "Matrix", + "Version": "1.5-3", + "Date": "2022-11-09", + "Priority": "recommended", + "Title": "Sparse and Dense Matrix Classes and Methods", + "Contact": "Matrix-authors@R-project.org", + "Maintainer": "Martin Maechler ", + "Authors@R": "c(person(\"Douglas\", \"Bates\", role = \"aut\")\n , person(\"Martin\", \"Maechler\", role = c(\"aut\", \"cre\"),\n email = \"mmaechler+Matrix@gmail.com\",\n comment = c(ORCID = \"0000-0002-8685-9910\"))\n , person(\"Mikael\", \"Jagan\", role = \"aut\",\n comment = c(ORCID = \"0000-0002-3542-2938\"))\n , person(\"Timothy A.\", \"Davis\", role = \"ctb\",\n comment = c(\"SuiteSparse and 'cs' C libraries, notably CHOLMOD and AMD\",\n\t \"collaborators listed in dir(pattern=\\\"^[A-Z]+[.]txt$\\\", full.names=TRUE, system.file(\\\"doc\\\", \\\"SuiteSparse\\\", package=\\\"Matrix\\\"))\"))\n , person(\"Jens\", \"Oehlschlägel\", role = \"ctb\",\n comment = \"initial nearPD()\")\n , person(\"Jason\", \"Riedy\", role = \"ctb\",\n comment = c(\"condest() and onenormest() for octave\",\n \t \t \"Copyright: Regents of the University of California\"))\n , person(\"R Core Team\", role = \"ctb\",\n comment = \"base R matrix implementation\")\n )", + "Description": "A rich hierarchy of matrix classes, including triangular,\n symmetric, and diagonal matrices, both dense and sparse and with\n pattern, logical and numeric entries. 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It also\n contains a number of lower level 'CLI' elements: rules, boxes, trees,\n and 'Unicode' symbols with 'ASCII' alternatives. It support ANSI\n colors and text styles as well.", + "License": "MIT + file LICENSE", + "URL": "https://cli.r-lib.org, https://github.com/r-lib/cli#readme", + "BugReports": "https://github.com/r-lib/cli/issues", + "Depends": "R (>= 3.4)", + "Imports": "utils", + "Suggests": "callr, covr, crayon, digest, glue (>= 1.6.0), grDevices,\nhtmltools, htmlwidgets, knitr, methods, mockery, processx, ps\n(>= 1.3.4.9000), rlang (>= 1.0.2.9003), rmarkdown, rprojroot,\nrstudioapi, testthat, tibble, whoami, withr", + "Config/Needs/website": "r-lib/asciicast, bench, brio, cpp11, decor, desc,\nfansi, prettyunits, sessioninfo, tidyverse/tidytemplate,\nusethis, vctrs", + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.1.9000", + "NeedsCompilation": "yes", + "Packaged": "2023-01-09 13:06:17 UTC; gaborcsardi", + "Author": "Gábor Csárdi [aut, cre],\n Hadley Wickham [ctb],\n Kirill Müller [ctb],\n RStudio [cph, fnd]", + "Maintainer": "Gábor Csárdi ", + "Repository": "CRAN", + "Date/Publication": "2023-01-09 14:40:02 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2023-01-10 12:58:35 UTC; unix", + "Archs": "cli.so.dSYM" + } + }, + "clipr": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Type": "Package", + "Package": "clipr", + "Title": "Read and Write from the System Clipboard", + "Version": "0.8.0", + "Authors@R": "c(\n person(\"Matthew\", \"Lincoln\", , \"matthew.d.lincoln@gmail.com\", role = c(\"aut\", \"cre\"),\n comment = c(ORCID = \"0000-0002-4387-3384\")),\n person(\"Louis\", \"Maddox\", role = \"ctb\"),\n person(\"Steve\", \"Simpson\", role = \"ctb\"),\n person(\"Jennifer\", \"Bryan\", role = \"ctb\")\n )", + "Description": "Simple utility functions to read from and write to\n the Windows, OS X, and X11 clipboards.", + "License": "GPL-3", + "URL": "https://github.com/mdlincoln/clipr,\nhttp://matthewlincoln.net/clipr/", + "BugReports": "https://github.com/mdlincoln/clipr/issues", + "Imports": "utils", + "Suggests": "covr, knitr, rmarkdown, rstudioapi (>= 0.5), testthat (>=\n2.0.0)", + "VignetteBuilder": "knitr", + "Encoding": "UTF-8", + "Language": "en-US", + "RoxygenNote": "7.1.2", + "SystemRequirements": "xclip (https://github.com/astrand/xclip) or xsel\n(http://www.vergenet.net/~conrad/software/xsel/) for accessing\nthe X11 clipboard, or wl-clipboard\n(https://github.com/bugaevc/wl-clipboard) for systems using\nWayland.", + "NeedsCompilation": "no", + "Packaged": "2022-02-19 02:20:21 UTC; mlincoln", + "Author": "Matthew Lincoln [aut, cre] (),\n Louis Maddox [ctb],\n Steve Simpson [ctb],\n Jennifer Bryan [ctb]", + "Maintainer": "Matthew Lincoln ", + "Repository": "CRAN", + "Date/Publication": "2022-02-22 00:58:45 UTC", + "Built": "R 4.2.0; ; 2022-05-13 02:20:35 UTC; unix" + } + }, + "colorspace": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "colorspace", + "Version": "2.1-0", + "Date": "2023-01-23", + "Title": "A Toolbox for Manipulating and Assessing Colors and Palettes", + "Authors@R": "c(person(given = \"Ross\", family = \"Ihaka\", role = \"aut\", email = \"ihaka@stat.auckland.ac.nz\"),\n person(given = \"Paul\", family = \"Murrell\", role = \"aut\", email = \"paul@stat.auckland.ac.nz\",\n comment = c(ORCID = \"0000-0002-3224-8858\")),\n person(given = \"Kurt\", family = \"Hornik\", role = \"aut\", email = \"Kurt.Hornik@R-project.org\",\n\t\t comment = c(ORCID = \"0000-0003-4198-9911\")),\n person(given = c(\"Jason\", \"C.\"), family = \"Fisher\", role = \"aut\", email = \"jfisher@usgs.gov\",\n comment = c(ORCID = \"0000-0001-9032-8912\")),\n person(given = \"Reto\", family = \"Stauffer\", role = \"aut\", email = \"Reto.Stauffer@uibk.ac.at\",\n comment = c(ORCID = \"0000-0002-3798-5507\")),\n person(given = c(\"Claus\", \"O.\"), family = \"Wilke\", role = \"aut\", email = \"wilke@austin.utexas.edu\",\n comment = c(ORCID = \"0000-0002-7470-9261\")),\n person(given = c(\"Claire\", \"D.\"), family = \"McWhite\", role = \"aut\", email = \"claire.mcwhite@utmail.utexas.edu\",\n comment = c(ORCID = \"0000-0001-7346-3047\")),\n person(given = \"Achim\", family = \"Zeileis\", role = c(\"aut\", \"cre\"), email = \"Achim.Zeileis@R-project.org\",\n comment = c(ORCID = \"0000-0003-0918-3766\")))", + "Description": "Carries out mapping between assorted color spaces including RGB, HSV, HLS,\n CIEXYZ, CIELUV, HCL (polar CIELUV), CIELAB, and polar CIELAB.\n\t Qualitative, sequential, and diverging color palettes based on HCL colors\n\t are provided along with corresponding ggplot2 color scales.\n\t Color palette choice is aided by an interactive app (with either a Tcl/Tk\n\t or a shiny graphical user interface) and shiny apps with an HCL color picker and a\n\t color vision deficiency emulator. Plotting functions for displaying\n\t and assessing palettes include color swatches, visualizations of the\n\t HCL space, and trajectories in HCL and/or RGB spectrum. Color manipulation\n\t functions include: desaturation, lightening/darkening, mixing, and\n\t simulation of color vision deficiencies (deutanomaly, protanomaly, tritanomaly).\n\t Details can be found on the project web page at \n\t and in the accompanying scientific paper: Zeileis et al. (2020, Journal of Statistical\n\t Software, ).", + "Depends": "R (>= 3.0.0), methods", + "Imports": "graphics, grDevices, stats", + "Suggests": "datasets, utils, KernSmooth, MASS, kernlab, mvtnorm, vcd,\ntcltk, shiny, shinyjs, ggplot2, dplyr, scales, grid, png, jpeg,\nknitr, rmarkdown, RColorBrewer, rcartocolor, scico, viridis,\nwesanderson", + "VignetteBuilder": "knitr", + "License": "BSD_3_clause + file LICENSE", + "URL": "https://colorspace.R-Forge.R-project.org/, https://hclwizard.org/", + "BugReports": "https://colorspace.R-Forge.R-project.org/contact.html", + "LazyData": "yes", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.3", + "NeedsCompilation": "yes", + "Packaged": "2023-01-23 08:50:11 UTC; zeileis", + "Author": "Ross Ihaka [aut],\n Paul Murrell [aut] (),\n Kurt Hornik [aut] (),\n Jason C. Fisher [aut] (),\n Reto Stauffer [aut] (),\n Claus O. Wilke [aut] (),\n Claire D. McWhite [aut] (),\n Achim Zeileis [aut, cre] ()", + "Maintainer": "Achim Zeileis ", + "Repository": "CRAN", + "Date/Publication": "2023-01-23 11:40:02 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2023-01-24 13:04:27 UTC; unix", + "Archs": "colorspace.so.dSYM" + } + }, + "cpp11": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "cpp11", + "Title": "A C++11 Interface for R's C Interface", + "Version": "0.4.3", + "Authors@R": "\n c(person(given = \"Jim\",\n family = \"Hester\",\n role = \"aut\",\n comment = c(ORCID = \"0000-0002-2739-7082\")),\n person(given = \"Romain\",\n family = \"François\",\n role = c(\"aut\", \"cre\"),\n email = \"romain@rstudio.com\"),\n person(given = \"Benjamin\",\n family = \"Kietzman\",\n role = \"ctb\"),\n person(given = \"RStudio\",\n role = c(\"cph\", \"fnd\")))", + "Description": "Provides a header only, C++11 interface to R's C\n interface. Compared to other approaches 'cpp11' strives to be safe\n against long jumps from the C API as well as C++ exceptions, conform\n to normal R function semantics and supports interaction with 'ALTREP'\n vectors.", + "License": "MIT + file LICENSE", + "URL": "https://cpp11.r-lib.org, https://github.com/r-lib/cpp11", + "BugReports": "https://github.com/r-lib/cpp11/issues", + "Suggests": "bench, brio, callr, cli, covr, decor, desc, ggplot2, glue,\nknitr, lobstr, mockery, progress, rmarkdown, scales, Rcpp,\ntestthat, tibble, utils, vctrs, withr", + "VignetteBuilder": "knitr", + "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Config/Needs/cpp11/cpp_register": "brio, cli, decor, desc, glue, tibble,\nvctrs", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.1", + "SystemRequirements": "C++11", + "NeedsCompilation": "no", + "Packaged": "2022-10-12 08:07:26 UTC; romainfrancois", + "Author": "Jim Hester [aut] (),\n Romain François [aut, cre],\n Benjamin Kietzman [ctb],\n RStudio [cph, fnd]", + "Maintainer": "Romain François ", + "Repository": "CRAN", + "Date/Publication": "2022-10-12 08:43:54 UTC", + "Built": "R 4.2.0; ; 2022-10-13 11:44:16 UTC; unix" + } + }, + "crayon": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "crayon", + "Title": "Colored Terminal Output", + "Version": "1.5.2", + "Authors@R": "c(\n person(\"Gábor\", \"Csárdi\", , \"csardi.gabor@gmail.com\",\n role = c(\"aut\", \"cre\")),\n person(\n \"Brodie\", \"Gaslam\", email=\"brodie.gaslam@yahoo.com\",\n role=c(\"ctb\"))\n )", + "Description": "The crayon package is now superseded. Please use the 'cli' package\n for new projects.\n Colored terminal output on terminals that support 'ANSI'\n color and highlight codes. It also works in 'Emacs' 'ESS'. 'ANSI'\n color support is automatically detected. Colors and highlighting can\n be combined and nested. New styles can also be created easily.\n This package was inspired by the 'chalk' 'JavaScript' project.", + "License": "MIT + file LICENSE", + "URL": "https://github.com/r-lib/crayon#readme", + "BugReports": "https://github.com/r-lib/crayon/issues", + "Collate": "'aaa-rstudio-detect.R' 'aaaa-rematch2.R'\n'aab-num-ansi-colors.R' 'aac-num-ansi-colors.R' 'ansi-256.r'\n'ansi-palette.R' 'combine.r' 'string.r' 'utils.r'\n'crayon-package.r' 'disposable.r' 'enc-utils.R' 'has_ansi.r'\n'has_color.r' 'link.R' 'styles.r' 'machinery.r' 'parts.r'\n'print.r' 'style-var.r' 'show.r' 'string_operations.r'", + "Imports": "grDevices, methods, utils", + "Suggests": "mockery, rstudioapi, testthat, withr", + "RoxygenNote": "7.1.2", + "Encoding": "UTF-8", + "NeedsCompilation": "no", + "Packaged": "2022-09-29 06:24:10 UTC; gaborcsardi", + "Author": "Gábor Csárdi [aut, cre],\n Brodie Gaslam [ctb]", + "Maintainer": "Gábor Csárdi ", + "Repository": "CRAN", + "Date/Publication": "2022-09-29 16:20:24 UTC", + "Built": "R 4.2.0; ; 2022-09-30 11:58:06 UTC; unix" + } + }, + "digest": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "digest", + "Author": "Dirk Eddelbuettel with contributions\n by Antoine Lucas, Jarek Tuszynski, Henrik Bengtsson, Simon Urbanek,\n Mario Frasca, Bryan Lewis, Murray Stokely, Hannes Muehleisen,\n Duncan Murdoch, Jim Hester, Wush Wu, Qiang Kou, Thierry Onkelinx,\n Michel Lang, Viliam Simko, Kurt Hornik, Radford Neal, Kendon Bell,\n Matthew de Queljoe, Ion Suruceanu, Bill Denney, Dirk Schumacher,\n and Winston Chang.", + "Version": "0.6.31", + "Date": "2022-12-10", + "Maintainer": "Dirk Eddelbuettel ", + "Title": "Create Compact Hash Digests of R Objects", + "Description": "Implementation of a function 'digest()' for the creation of hash\n digests of arbitrary R objects (using the 'md5', 'sha-1', 'sha-256', 'crc32',\n 'xxhash', 'murmurhash', 'spookyhash' and 'blake3' algorithms) permitting easy\n comparison of R language objects, as well as functions such as'hmac()' to\n create hash-based message authentication code. Please note that this package\n is not meant to be deployed for cryptographic purposes for which more\n comprehensive (and widely tested) libraries such as 'OpenSSL' should be\n used.", + "URL": "https://github.com/eddelbuettel/digest,\nhttp://dirk.eddelbuettel.com/code/digest.html", + "BugReports": "https://github.com/eddelbuettel/digest/issues", + "Depends": "R (>= 3.3.0)", + "Imports": "utils", + "License": "GPL (>= 2)", + "Suggests": "tinytest, simplermarkdown", + "VignetteBuilder": "simplermarkdown", + "NeedsCompilation": "yes", + "Packaged": "2022-12-10 18:30:14 UTC; edd", + "Repository": "CRAN", + "Date/Publication": "2022-12-11 07:40:02 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2022-12-12 12:22:51 UTC; unix", + "Archs": "digest.so.dSYM" + } + }, + "dplyr": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Type": "Package", + "Package": "dplyr", + "Title": "A Grammar of Data Manipulation", + "Version": "1.1.0", + "Authors@R": "c(\n person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\"),\n comment = c(ORCID = \"0000-0003-4757-117X\")),\n person(\"Romain\", \"François\", role = \"aut\",\n comment = c(ORCID = \"0000-0002-2444-4226\")),\n person(\"Lionel\", \"Henry\", role = \"aut\"),\n person(\"Kirill\", \"Müller\", role = \"aut\",\n comment = c(ORCID = \"0000-0002-1416-3412\")),\n person(\"Davis\", \"Vaughan\", , \"davis@posit.co\", role = \"aut\",\n comment = c(ORCID = \"0000-0003-4777-038X\")),\n person(\"Posit, PBC\", role = c(\"cph\", \"fnd\"))\n )", + "Description": "A fast, consistent tool for working with data frame like\n objects, both in memory and out of memory.", + "License": "MIT + file LICENSE", + "URL": "https://dplyr.tidyverse.org, https://github.com/tidyverse/dplyr", + "BugReports": "https://github.com/tidyverse/dplyr/issues", + "Depends": "R (>= 3.4.0)", + "Imports": "cli (>= 3.4.0), generics, glue (>= 1.3.2), lifecycle (>=\n1.0.3), magrittr (>= 1.5), methods, pillar (>= 1.5.1), R6,\nrlang (>= 1.0.6), tibble (>= 2.1.3), tidyselect (>= 1.2.0),\nutils, vctrs (>= 0.5.2)", + "Suggests": "bench, broom, callr, covr, DBI, dbplyr (>= 2.2.1), ggplot2,\nknitr, Lahman, lobstr, microbenchmark, nycflights13, purrr,\nrmarkdown, RMySQL, RPostgreSQL, RSQLite, stringi (>= 1.7.6),\ntestthat (>= 3.1.5), tidyr (>= 1.3.0), withr", + "VignetteBuilder": "knitr", + "Config/Needs/website": "tidyverse, shiny, pkgdown, tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "LazyData": "true", + "RoxygenNote": "7.2.3", + "NeedsCompilation": "yes", + "Packaged": "2023-01-27 21:00:09 UTC; hadleywickham", + "Author": "Hadley Wickham [aut, cre] (),\n Romain François [aut] (),\n Lionel Henry [aut],\n Kirill Müller [aut] (),\n Davis Vaughan [aut] (),\n Posit, PBC [cph, fnd]", + "Maintainer": "Hadley Wickham ", + "Repository": "CRAN", + "Date/Publication": "2023-01-29 22:50:02 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2023-01-31 14:14:20 UTC; unix", + "Archs": "dplyr.so.dSYM" + } + }, + "ellipsis": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "ellipsis", + "Version": "0.3.2", + "Title": "Tools for Working with ...", + "Description": "The ellipsis is a powerful tool for extending functions. Unfortunately \n this power comes at a cost: misspelled arguments will be silently ignored. \n The ellipsis package provides a collection of functions to catch problems\n and alert the user.", + "Authors@R": "c(\n person(\"Hadley\", \"Wickham\", , \"hadley@rstudio.com\", role = c(\"aut\", \"cre\")),\n person(\"RStudio\", role = \"cph\")\n )", + "License": "MIT + file LICENSE", + "Encoding": "UTF-8", + "RoxygenNote": "7.1.1", + "URL": "https://ellipsis.r-lib.org, https://github.com/r-lib/ellipsis", + "BugReports": "https://github.com/r-lib/ellipsis/issues", + "Depends": "R (>= 3.2)", + "Imports": "rlang (>= 0.3.0)", + "Suggests": "covr, testthat", + "NeedsCompilation": "yes", + "Packaged": "2021-04-29 12:06:44 UTC; lionel", + "Author": "Hadley Wickham [aut, cre],\n RStudio [cph]", + "Maintainer": "Hadley Wickham ", + "Repository": "CRAN", + "Date/Publication": "2021-04-29 12:40:02 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2022-04-25 03:08:12 UTC; unix", + "Archs": "ellipsis.so.dSYM" + } + }, + "evaluate": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "evaluate", + "Type": "Package", + "Title": "Parsing and Evaluation Tools that Provide More Details than the\nDefault", + "Version": "0.20", + "Authors@R": "c(\n person(\"Hadley\", \"Wickham\", role = \"aut\"),\n person(\"Yihui\", \"Xie\", role = c(\"aut\", \"cre\"), email = \"xie@yihui.name\", comment = c(ORCID = \"0000-0003-0645-5666\")),\n person(\"Michael\", \"Lawrence\", role = \"ctb\"),\n person(\"Thomas\", \"Kluyver\", role = \"ctb\"),\n person(\"Jeroen\", \"Ooms\", role = \"ctb\"),\n person(\"Barret\", \"Schloerke\", role = \"ctb\"),\n person(\"Adam\", \"Ryczkowski\", role = \"ctb\"),\n person(\"Hiroaki\", \"Yutani\", role = \"ctb\"),\n person(\"Michel\", \"Lang\", role = \"ctb\"),\n person(\"Karolis\", \"Koncevičius\", role = \"ctb\")\n )", + "Description": "Parsing and evaluation tools that make it easy to recreate the\n command line behaviour of R.", + "License": "MIT + file LICENSE", + "URL": "https://github.com/r-lib/evaluate", + "BugReports": "https://github.com/r-lib/evaluate/issues", + "Depends": "R (>= 3.0.2)", + "Imports": "methods", + "Suggests": "covr, ggplot2, lattice, testthat", + "RoxygenNote": "7.2.3", + "Encoding": "UTF-8", + "NeedsCompilation": "no", + "Packaged": "2023-01-17 19:08:31 UTC; yihui", + "Author": "Hadley Wickham [aut],\n Yihui Xie [aut, cre] (),\n Michael Lawrence [ctb],\n Thomas Kluyver [ctb],\n Jeroen Ooms [ctb],\n Barret Schloerke [ctb],\n Adam Ryczkowski [ctb],\n Hiroaki Yutani [ctb],\n Michel Lang [ctb],\n Karolis Koncevičius [ctb]", + "Maintainer": "Yihui Xie ", + "Repository": "CRAN", + "Date/Publication": "2023-01-17 20:20:02 UTC", + "Built": "R 4.2.0; ; 2023-01-18 13:09:44 UTC; unix" + } + }, + "fansi": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "fansi", + "Title": "ANSI Control Sequence Aware String Functions", + "Description": "Counterparts to R string manipulation functions that account for\n the effects of ANSI text formatting control sequences.", + "Version": "1.0.4", + "Authors@R": "c(\n person(\"Brodie\", \"Gaslam\", email=\"brodie.gaslam@yahoo.com\",\n role=c(\"aut\", \"cre\")),\n person(\"Elliott\", \"Sales De Andrade\", role=\"ctb\"),\n person(family=\"R Core Team\",\n email=\"R-core@r-project.org\", role=\"cph\",\n comment=\"UTF8 byte length calcs from src/util.c\"\n ))", + "Depends": "R (>= 3.1.0)", + "License": "GPL-2 | GPL-3", + "URL": "https://github.com/brodieG/fansi", + "BugReports": "https://github.com/brodieG/fansi/issues", + "VignetteBuilder": "knitr", + "Suggests": "unitizer, knitr, rmarkdown", + "Imports": "grDevices, utils", + "RoxygenNote": "7.1.1", + "Encoding": "UTF-8", + "Collate": "'constants.R' 'fansi-package.R' 'internal.R' 'load.R' 'misc.R'\n'nchar.R' 'strwrap.R' 'strtrim.R' 'strsplit.R' 'substr2.R'\n'trimws.R' 'tohtml.R' 'unhandled.R' 'normalize.R' 'sgr.R'", + "NeedsCompilation": "yes", + "Packaged": "2023-01-22 17:39:01 UTC; bg", + "Author": "Brodie Gaslam [aut, cre],\n Elliott Sales De Andrade [ctb],\n R Core Team [cph] (UTF8 byte length calcs from src/util.c)", + "Maintainer": "Brodie Gaslam ", + "Repository": "CRAN", + "Date/Publication": "2023-01-22 19:20:02 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2023-01-23 12:49:22 UTC; unix", + "Archs": "fansi.so.dSYM" + } + }, + "farver": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Type": "Package", + "Package": "farver", + "Title": "High Performance Colour Space Manipulation", + "Version": "2.1.1", + "Authors@R": "c(\n person(\"Thomas Lin\", \"Pedersen\", , \"thomasp85@gmail.com\", role = c(\"cre\", \"aut\"),\n comment = c(ORCID = \"0000-0002-5147-4711\")),\n person(\"Berendea\", \"Nicolae\", role = \"aut\",\n comment = \"Author of the ColorSpace C++ library\"),\n person(\"Romain\", \"François\", , \"romain@purrple.cat\", role = \"aut\",\n comment = c(ORCID = \"0000-0002-2444-4226\"))\n )", + "Maintainer": "Thomas Lin Pedersen ", + "Description": "The encoding of colour can be handled in many different ways,\n using different colour spaces. As different colour spaces have\n different uses, efficient conversion between these representations are\n important. The 'farver' package provides a set of functions that gives\n access to very fast colour space conversion and comparisons\n implemented in C++, and offers speed improvements over the\n 'convertColor' function in the 'grDevices' package.", + "License": "MIT + file LICENSE", + "URL": "https://farver.data-imaginist.com,\nhttps://github.com/thomasp85/farver", + "BugReports": "https://github.com/thomasp85/farver/issues", + "Suggests": "covr, testthat (>= 3.0.0)", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.0", + "SystemRequirements": "C++11", + "Config/testthat/edition": "3", + "NeedsCompilation": "yes", + "Packaged": "2022-07-06 12:54:24 UTC; thomas", + "Author": "Thomas Lin Pedersen [cre, aut]\n (),\n Berendea Nicolae [aut] (Author of the ColorSpace C++ library),\n Romain François [aut] ()", + "Repository": "CRAN", + "Date/Publication": "2022-07-06 13:50:02 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2022-07-07 11:24:33 UTC; unix", + "Archs": "farver.so.dSYM" + } + }, + "fastmap": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "fastmap", + "Title": "Fast Data Structures", + "Version": "1.1.1", + "Authors@R": "c(\n person(\"Winston\", \"Chang\", email = \"winston@rstudio.com\", role = c(\"aut\", \"cre\")),\n person(given = \"RStudio\", role = c(\"cph\", \"fnd\")),\n person(given = \"Tessil\", role = \"cph\", comment = \"hopscotch_map library\")\n )", + "Description": "Fast implementation of data structures, including a key-value\n store, stack, and queue. Environments are commonly used as key-value stores\n in R, but every time a new key is used, it is added to R's global symbol\n table, causing a small amount of memory leakage. This can be problematic in\n cases where many different keys are used. 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gaborcsardi", + "Author": "Jim Hester [aut],\n Hadley Wickham [aut],\n Gábor Csárdi [aut, cre],\n libuv project contributors [cph] (libuv library),\n Joyent, Inc. and other Node contributors [cph] (libuv library),\n RStudio [cph, fnd]", + "Maintainer": "Gábor Csárdi ", + "Repository": "CRAN", + "Date/Publication": "2023-02-06 21:22:33 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2023-02-07 12:58:30 UTC; unix", + "Archs": "fs.so.dSYM" + } + }, + "generics": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "generics", + "Title": "Common S3 Generics not Provided by Base R Methods Related to\nModel Fitting", + "Version": "0.1.3", + "Authors@R": "c(\n person(\"Hadley\", \"Wickham\", , \"hadley@rstudio.com\", role = c(\"aut\", \"cre\")),\n person(\"Max\", \"Kuhn\", , \"max@rstudio.com\", role = \"aut\"),\n person(\"Davis\", \"Vaughan\", , \"davis@rstudio.com\", role = \"aut\"),\n person(\"RStudio\", role = \"cph\")\n )", + "Description": "In order to reduce potential package dependencies and\n conflicts, generics provides a number of commonly used S3 generics.", + "License": "MIT + file LICENSE", + "URL": "https://generics.r-lib.org, https://github.com/r-lib/generics", + "BugReports": "https://github.com/r-lib/generics/issues", + "Depends": "R (>= 3.2)", + "Imports": "methods", + "Suggests": "covr, pkgload, testthat (>= 3.0.0), tibble, withr", + "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.0", + "NeedsCompilation": "no", + "Packaged": "2022-07-05 14:52:13 UTC; 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The 'gtable' package defines a 'gtable' grob class that specifies a\n grid along with a list of grobs and their placement in the grid. Further the\n package makes it easy to manipulate and combine 'gtable' objects so that \n complex compositions can be built up sequentially.", + "License": "MIT + file LICENSE", + "Depends": "R (>= 3.5)", + "Imports": "cli, glue, grid, lifecycle, rlang (>= 1.1.0)", + "Suggests": "covr, ggplot2, knitr, profvis, rmarkdown, testthat (>= 3.0.0)", + "VignetteBuilder": "knitr", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.3", + "URL": "https://gtable.r-lib.org, https://github.com/r-lib/gtable", + "BugReports": "https://github.com/r-lib/gtable/issues", + "Config/testthat/edition": "3", + "Config/Needs/website": "tidyverse/tidytemplate", + "NeedsCompilation": "no", + "Packaged": "2023-03-21 13:17:30 UTC; thomas", + "Author": "Hadley Wickham [aut],\n Thomas Lin Pedersen [aut, cre],\n Posit Software, PBC [cph]", + "Maintainer": "Thomas Lin Pedersen ", + "Repository": "CRAN", + "Date/Publication": "2023-03-21 14:00:05 UTC", + "Built": "R 4.2.0; ; 2023-03-21 20:54:41 UTC; unix" + } + }, + "here": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "here", + "Title": "A Simpler Way to Find Your Files", + "Version": "1.0.1", + "Date": "2020-12-13", + "Authors@R": "\n c(person(given = \"Kirill\",\n family = \"M\\u00fcller\",\n role = c(\"aut\", \"cre\"),\n email = \"krlmlr+r@mailbox.org\",\n comment = c(ORCID = \"0000-0002-1416-3412\")),\n person(given = \"Jennifer\",\n family = \"Bryan\",\n role = \"ctb\",\n email = \"jenny@rstudio.com\",\n comment = c(ORCID = \"0000-0002-6983-2759\")))", + "Description": "Constructs paths to your project's files.\n Declare the relative path of a file within your project with 'i_am()'.\n Use the 'here()' function as a drop-in replacement for 'file.path()',\n it will always locate the files relative to your project root.", + "License": "MIT + file LICENSE", + "URL": "https://here.r-lib.org/, https://github.com/r-lib/here", + "BugReports": "https://github.com/r-lib/here/issues", + "Imports": "rprojroot (>= 2.0.2)", + "Suggests": "conflicted, covr, fs, knitr, palmerpenguins, plyr, readr,\nrlang, rmarkdown, testthat, uuid, withr", + "VignetteBuilder": "knitr", + "Encoding": "UTF-8", + "LazyData": "true", + "RoxygenNote": "7.1.1.9000", + "Config/testthat/edition": "3", + "NeedsCompilation": "no", + "Packaged": "2020-12-13 06:59:33 UTC; kirill", + "Author": "Kirill Müller [aut, cre] (),\n Jennifer Bryan [ctb] ()", + "Maintainer": "Kirill Müller ", + "Repository": "CRAN", + "Date/Publication": "2020-12-13 07:30:02 UTC", + "Built": "R 4.2.0; ; 2022-04-25 05:01:45 UTC; unix" + } + }, + "highr": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "highr", + "Type": "Package", + "Title": "Syntax Highlighting for R Source Code", + "Version": "0.10", + "Authors@R": "c(\n person(\"Yihui\", \"Xie\", role = c(\"aut\", \"cre\"), email = \"xie@yihui.name\", comment = c(ORCID = \"0000-0003-0645-5666\")),\n person(\"Yixuan\", \"Qiu\", role = \"aut\"),\n person(\"Christopher\", \"Gandrud\", role = \"ctb\"),\n person(\"Qiang\", \"Li\", role = \"ctb\")\n )", + "Description": "Provides syntax highlighting for R source code. Currently it\n supports LaTeX and HTML output. Source code of other languages is supported\n via Andre Simon's highlight package ().", + "Depends": "R (>= 3.3.0)", + "Imports": "xfun (>= 0.18)", + "Suggests": "knitr, markdown, testit", + "License": "GPL", + "URL": "https://github.com/yihui/highr", + "BugReports": "https://github.com/yihui/highr/issues", + "VignetteBuilder": "knitr", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.3", + "NeedsCompilation": "no", + "Packaged": "2022-12-22 06:43:07 UTC; yihui", + "Author": "Yihui Xie [aut, cre] (),\n Yixuan Qiu [aut],\n Christopher Gandrud [ctb],\n Qiang Li [ctb]", + "Maintainer": "Yihui Xie ", + "Repository": "CRAN", + "Date/Publication": "2022-12-22 07:00:02 UTC", + "Built": "R 4.2.0; ; 2022-12-23 12:44:31 UTC; unix" + } + }, + "hms": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "hms", + "Title": "Pretty Time of Day", + "Date": "2023-03-21", + "Version": "1.1.3", + "Authors@R": "c(\n person(\"Kirill\", \"Müller\", role = c(\"aut\", \"cre\"), email = \"kirill@cynkra.com\", comment = c(ORCID = \"0000-0002-1416-3412\")),\n person(\"R Consortium\", role = \"fnd\"),\n person(\"RStudio\", role = \"fnd\")\n )", + "Description": "Implements an S3 class for storing and formatting time-of-day\n values, based on the 'difftime' class.", + "Imports": "lifecycle, methods, pkgconfig, rlang (>= 1.0.2), vctrs (>=\n0.3.8)", + "Suggests": "crayon, lubridate, pillar (>= 1.1.0), testthat (>= 3.0.0)", + "License": "MIT + file LICENSE", + "Encoding": "UTF-8", + "URL": "https://hms.tidyverse.org/, https://github.com/tidyverse/hms", + "BugReports": "https://github.com/tidyverse/hms/issues", + "RoxygenNote": "7.2.3", + "Config/testthat/edition": "3", + "Config/autostyle/scope": "line_breaks", + "Config/autostyle/strict": "false", + "Config/Needs/website": "tidyverse/tidytemplate", + "NeedsCompilation": "no", + "Packaged": "2023-03-21 16:52:11 UTC; kirill", + "Author": "Kirill Müller [aut, cre] (),\n R Consortium [fnd],\n RStudio [fnd]", + "Maintainer": "Kirill Müller ", + "Repository": "CRAN", + "Date/Publication": "2023-03-21 18:10:02 UTC", + "Built": "R 4.2.0; ; 2023-03-21 20:54:39 UTC; unix" + } + }, + "htmltools": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "htmltools", + "Type": "Package", + "Title": "Tools for HTML", + "Version": "0.5.4", + "Authors@R": "c(\n person(\"Joe\", \"Cheng\", role = \"aut\", email = \"joe@rstudio.com\"),\n person(\"Carson\", \"Sievert\", role = c(\"aut\", \"cre\"), email = \"carson@rstudio.com\", comment = c(ORCID = \"0000-0002-4958-2844\")),\n person(\"Barret\", \"Schloerke\", role = \"aut\", email = \"barret@rstudio.com\", comment = c(ORCID = \"0000-0001-9986-114X\")),\n person(\"Winston\", \"Chang\", role = \"aut\", email = \"winston@rstudio.com\", comment = c(ORCID = \"0000-0002-1576-2126\")),\n person(\"Yihui\", \"Xie\", role = \"aut\", email = \"yihui@rstudio.com\"),\n person(\"Jeff\", \"Allen\", role = \"aut\", email = \"jeff@rstudio.com\"),\n person(family = \"RStudio\", role = \"cph\")\n )", + "Description": "Tools for HTML generation and output.", + "Depends": "R (>= 2.14.1)", + "Imports": "utils, digest, grDevices, base64enc, rlang (>= 0.4.10),\nfastmap (>= 1.1.0), ellipsis", + "Suggests": "markdown, testthat, withr, Cairo, ragg, shiny", + "Enhances": "knitr", + "License": "GPL (>= 2)", + "URL": "https://github.com/rstudio/htmltools,\nhttps://rstudio.github.io/htmltools/", + "BugReports": "https://github.com/rstudio/htmltools/issues", + "RoxygenNote": "7.2.2", + "Encoding": "UTF-8", + "Collate": "'colors.R' 'fill.R' 'html_dependency.R' 'html_escape.R'\n'html_print.R' 'images.R' 'known_tags.R' 'selector.R'\n'staticimports.R' 'tag_query.R' 'utils.R' 'tags.R' 'template.R'", + "Config/Needs/website": "rstudio/quillt, bench", + "NeedsCompilation": "yes", + "Packaged": "2022-12-07 17:55:41 UTC; cpsievert", + "Author": "Joe Cheng [aut],\n Carson Sievert [aut, cre] (),\n Barret Schloerke [aut] (),\n Winston Chang [aut] (),\n Yihui Xie [aut],\n Jeff Allen [aut],\n RStudio [cph]", + "Maintainer": "Carson Sievert ", + "Repository": "CRAN", + "Date/Publication": "2022-12-07 20:50:06 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2022-12-08 12:40:52 UTC; unix", + "Archs": "htmltools.so.dSYM" + } + }, + "isoband": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "isoband", + "Title": "Generate Isolines and Isobands from Regularly Spaced Elevation\nGrids", + "Version": "0.2.7", + "Authors@R": "c(\n person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = c(\"aut\", \"cre\"),\n comment = c(ORCID = \"0000-0003-4757-117X\")),\n person(\"Claus O.\", \"Wilke\", , \"wilke@austin.utexas.edu\", role = \"aut\",\n comment = c(\"Original author\", ORCID = \"0000-0002-7470-9261\")),\n person(\"Thomas Lin\", \"Pedersen\", , \"thomasp85@gmail.com\", role = \"aut\",\n comment = c(ORCID = \"0000-0002-5147-4711\"))\n )", + "Description": "A fast C++ implementation to generate contour lines\n (isolines) and contour polygons (isobands) from regularly spaced grids\n containing elevation data.", + "License": "MIT + file LICENSE", + "URL": "https://isoband.r-lib.org", + "BugReports": "https://github.com/r-lib/isoband/issues", + "Imports": "grid, utils", + "Suggests": "covr, ggplot2, knitr, magick, microbenchmark, rmarkdown, sf,\ntestthat, xml2", + "VignetteBuilder": "knitr", + "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.3", + "SystemRequirements": "C++11", + "NeedsCompilation": "yes", + "Packaged": "2022-12-19 20:10:02 UTC; hadleywickham", + "Author": "Hadley Wickham [aut, cre] (),\n Claus O. Wilke [aut] (Original author,\n ),\n Thomas Lin Pedersen [aut] ()", + "Maintainer": "Hadley Wickham ", + "Repository": "CRAN", + "Date/Publication": "2022-12-20 10:00:13 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2022-12-21 12:45:46 UTC; unix", + "Archs": "isoband.so.dSYM" + } + }, + "jquerylib": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "jquerylib", + "Title": "Obtain 'jQuery' as an HTML Dependency Object", + "Version": "0.1.4", + "Authors@R": "c(\n person(\"Carson\", \"Sievert\", role = c(\"aut\", \"cre\"), email = \"carson@rstudio.com\", comment = c(ORCID = \"0000-0002-4958-2844\")),\n person(\"Joe\", \"Cheng\", role = \"aut\", email = \"joe@rstudio.com\"),\n person(family = \"RStudio\", role = \"cph\"),\n person(family = \"jQuery Foundation\", role = \"cph\",\n comment = \"jQuery library and jQuery UI library\"),\n person(family = \"jQuery contributors\", role = c(\"ctb\", \"cph\"),\n comment = \"jQuery library; authors listed in inst/lib/jquery-AUTHORS.txt\")\n )", + "Description": "Obtain any major version of 'jQuery' () and use it in any webpage generated by 'htmltools' (e.g. 'shiny', 'htmlwidgets', and 'rmarkdown').\n Most R users don't need to use this package directly, but other R packages (e.g. 'shiny', 'rmarkdown', etc.) depend on this package to avoid bundling redundant copies of 'jQuery'.", + "License": "MIT + file LICENSE", + "Encoding": "UTF-8", + "Config/testthat/edition": "3", + "RoxygenNote": "7.0.2", + "Imports": "htmltools", + "Suggests": "testthat", + "NeedsCompilation": "no", + "Packaged": "2021-04-26 16:40:21 UTC; cpsievert", + "Author": "Carson Sievert [aut, cre] (),\n Joe Cheng [aut],\n RStudio [cph],\n jQuery Foundation [cph] (jQuery library and jQuery UI library),\n jQuery contributors [ctb, cph] (jQuery library; authors listed in\n inst/lib/jquery-AUTHORS.txt)", + "Maintainer": "Carson Sievert ", + "Repository": "CRAN", + "Date/Publication": "2021-04-26 17:10:02 UTC", + "Built": "R 4.2.0; ; 2022-04-26 22:34:33 UTC; unix" + } + }, + "jsonlite": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "jsonlite", + "Version": "1.8.4", + "Title": "A Simple and Robust JSON Parser and Generator for R", + "License": "MIT + file LICENSE", + "Depends": "methods", + "Authors@R": "c(\n person(\"Jeroen\", \"Ooms\", role = c(\"aut\", \"cre\"), email = \"jeroen@berkeley.edu\",\n comment = c(ORCID = \"0000-0002-4035-0289\")),\n person(\"Duncan\", \"Temple Lang\", role = \"ctb\"),\n person(\"Lloyd\", \"Hilaiel\", role = \"cph\", comment=\"author of bundled libyajl\"))", + "URL": "https://arxiv.org/abs/1403.2805 (paper)", + "BugReports": "https://github.com/jeroen/jsonlite/issues", + "Maintainer": "Jeroen Ooms ", + "VignetteBuilder": "knitr, R.rsp", + "Description": "A reasonably fast JSON parser and generator, optimized for statistical \n data and the web. Offers simple, flexible tools for working with JSON in R, and\n is particularly powerful for building pipelines and interacting with a web API. \n The implementation is based on the mapping described in the vignette (Ooms, 2014).\n In addition to converting JSON data from/to R objects, 'jsonlite' contains \n functions to stream, validate, and prettify JSON data. The unit tests included \n with the package verify that all edge cases are encoded and decoded consistently \n for use with dynamic data in systems and applications.", + "Suggests": "httr, vctrs, testthat, knitr, rmarkdown, R.rsp, sf", + "RoxygenNote": "7.2.1", + "Encoding": "UTF-8", + "NeedsCompilation": "yes", + "Packaged": "2022-12-05 23:21:23 UTC; jeroen", + "Author": "Jeroen Ooms [aut, cre] (),\n Duncan Temple Lang [ctb],\n Lloyd Hilaiel [cph] (author of bundled libyajl)", + "Repository": "CRAN", + "Date/Publication": "2022-12-06 08:10:02 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2022-12-07 12:37:27 UTC; unix", + "Archs": "jsonlite.so.dSYM" + } + }, + "knitr": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "knitr", + "Type": "Package", + "Title": "A General-Purpose Package for Dynamic Report Generation in R", + "Version": "1.42", + "Authors@R": "c(\n person(\"Yihui\", \"Xie\", role = c(\"aut\", \"cre\"), email = 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\"Dervieux\", role = \"ctb\"),\n person(\"David\", \"Hall\", role = \"ctb\"),\n person(\"David\", \"Hugh-Jones\", role = \"ctb\"),\n person(\"David\", \"Robinson\", role = \"ctb\"),\n person(\"Doug\", \"Hemken\", role = \"ctb\"),\n person(\"Duncan\", \"Murdoch\", role = \"ctb\"),\n person(\"Elio\", \"Campitelli\", role = \"ctb\"),\n person(\"Ellis\", \"Hughes\", role = \"ctb\"),\n person(\"Emily\", \"Riederer\", role = \"ctb\"),\n person(\"Fabian\", \"Hirschmann\", role = \"ctb\"),\n person(\"Fitch\", \"Simeon\", role = \"ctb\"),\n person(\"Forest\", \"Fang\", role = \"ctb\"),\n person(c(\"Frank\", \"E\", \"Harrell\", \"Jr\"), role = \"ctb\", comment = \"the Sweavel package at inst/misc/Sweavel.sty\"),\n person(\"Garrick\", \"Aden-Buie\", role = \"ctb\"),\n person(\"Gregoire\", \"Detrez\", role = \"ctb\"),\n person(\"Hadley\", \"Wickham\", role = \"ctb\"),\n person(\"Hao\", \"Zhu\", role = \"ctb\"),\n person(\"Heewon\", \"Jeon\", role = \"ctb\"),\n person(\"Henrik\", \"Bengtsson\", 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\"Meyer\", role = \"ctb\"),\n person(\"Sietse\", \"Brouwer\", role = \"ctb\"),\n person(c(\"Simon\", \"de\"), \"Bernard\", role = \"ctb\"),\n person(\"Sylvain\", \"Rousseau\", role = \"ctb\"),\n person(\"Taiyun\", \"Wei\", role = \"ctb\"),\n person(\"Thibaut\", \"Assus\", role = \"ctb\"),\n person(\"Thibaut\", \"Lamadon\", role = \"ctb\"),\n person(\"Thomas\", \"Leeper\", role = \"ctb\"),\n person(\"Tim\", \"Mastny\", role = \"ctb\"),\n person(\"Tom\", \"Torsney-Weir\", role = \"ctb\"),\n person(\"Trevor\", \"Davis\", role = \"ctb\"),\n person(\"Viktoras\", \"Veitas\", role = \"ctb\"),\n person(\"Weicheng\", \"Zhu\", role = \"ctb\"),\n person(\"Wush\", \"Wu\", role = \"ctb\"),\n person(\"Zachary\", \"Foster\", role = \"ctb\"),\n person(\"Zhian N.\", \"Kamvar\", role = \"ctb\", comment = c(ORCID = \"0000-0003-1458-7108\"))\n )", + "Description": "Provides a general-purpose tool for dynamic report generation in R\n using Literate Programming techniques.", + "Depends": "R (>= 3.3.0)", + "Imports": "evaluate (>= 0.15), highr, methods, yaml (>= 2.1.19), xfun (>=\n0.34), tools", + "Suggests": "markdown (>= 1.3), formatR, testit, digest, rgl (>=\n0.95.1201), codetools, rmarkdown, htmlwidgets (>= 0.7),\nwebshot, tikzDevice (>= 0.10), tinytex, reticulate (>= 1.4),\nJuliaCall (>= 0.11.1), magick, png, jpeg, gifski, xml2 (>=\n1.2.0), httr, DBI (>= 0.4-1), showtext, tibble, sass, bslib,\nragg, gridSVG, styler (>= 1.2.0), targets (>= 0.6.0)", + "License": "GPL", + "URL": "https://yihui.org/knitr/", + "BugReports": "https://github.com/yihui/knitr/issues", + "Encoding": "UTF-8", + "VignetteBuilder": "knitr", + "SystemRequirements": "Package vignettes based on R Markdown v2 or\nreStructuredText require Pandoc (http://pandoc.org). The\nfunction rst2pdf() requires rst2pdf\n(https://github.com/rst2pdf/rst2pdf).", + "Collate": "'block.R' 'cache.R' 'utils.R' 'citation.R' 'hooks-html.R'\n'plot.R' 'defaults.R' 'concordance.R' 'engine.R' 'highlight.R'\n'themes.R' 'header.R' 'hooks-asciidoc.R' 'hooks-chunk.R'\n'hooks-extra.R' 'hooks-latex.R' 'hooks-md.R' 'hooks-rst.R'\n'hooks-textile.R' 'hooks.R' 'output.R' 'package.R' 'pandoc.R'\n'params.R' 'parser.R' 'pattern.R' 'rocco.R' 'spin.R' 'table.R'\n'template.R' 'utils-conversion.R' 'utils-rd2html.R'\n'utils-string.R' 'utils-sweave.R' 'utils-upload.R'\n'utils-vignettes.R' 'zzz.R'", + "RoxygenNote": "7.2.3", + "NeedsCompilation": "no", + "Packaged": "2023-01-20 05:51:44 UTC; yihui", + "Author": "Yihui Xie [aut, cre] (),\n Abhraneel Sarma [ctb],\n Adam Vogt [ctb],\n Alastair Andrew [ctb],\n Alex Zvoleff [ctb],\n Amar Al-Zubaidi [ctb],\n Andre Simon [ctb] (the CSS files under inst/themes/ were derived from\n the Highlight package http://www.andre-simon.de),\n Aron Atkins [ctb],\n Aaron Wolen [ctb],\n Ashley Manton [ctb],\n Atsushi Yasumoto [ctb] (),\n Ben Baumer [ctb],\n Brian Diggs [ctb],\n Brian Zhang [ctb],\n Bulat Yapparov [ctb],\n Cassio Pereira [ctb],\n Christophe Dervieux [ctb],\n David Hall [ctb],\n David Hugh-Jones [ctb],\n David Robinson [ctb],\n Doug Hemken [ctb],\n Duncan Murdoch [ctb],\n Elio Campitelli [ctb],\n Ellis Hughes [ctb],\n Emily Riederer [ctb],\n Fabian Hirschmann [ctb],\n Fitch Simeon [ctb],\n Forest Fang [ctb],\n Frank E Harrell Jr [ctb] (the Sweavel package at inst/misc/Sweavel.sty),\n Garrick Aden-Buie [ctb],\n Gregoire Detrez [ctb],\n Hadley Wickham [ctb],\n Hao Zhu [ctb],\n Heewon Jeon [ctb],\n Henrik Bengtsson [ctb],\n Hiroaki Yutani [ctb],\n Ian Lyttle [ctb],\n Hodges Daniel [ctb],\n Jacob Bien [ctb],\n Jake Burkhead [ctb],\n James Manton [ctb],\n Jared Lander [ctb],\n Jason Punyon [ctb],\n Javier Luraschi [ctb],\n Jeff Arnold [ctb],\n Jenny Bryan [ctb],\n Jeremy Ashkenas [ctb, cph] (the CSS file at\n inst/misc/docco-classic.css),\n Jeremy Stephens [ctb],\n Jim Hester [ctb],\n Joe Cheng [ctb],\n Johannes Ranke [ctb],\n John Honaker [ctb],\n John Muschelli [ctb],\n Jonathan Keane [ctb],\n JJ Allaire [ctb],\n Johan Toloe [ctb],\n Jonathan Sidi [ctb],\n Joseph Larmarange [ctb],\n Julien Barnier [ctb],\n Kaiyin Zhong [ctb],\n Kamil Slowikowski [ctb],\n Karl Forner [ctb],\n Kevin K. Smith [ctb],\n Kirill Mueller [ctb],\n Kohske Takahashi [ctb],\n Lorenz Walthert [ctb],\n Lucas Gallindo [ctb],\n Marius Hofert [ctb],\n Martin Modrák [ctb],\n Michael Chirico [ctb],\n Michael Friendly [ctb],\n Michal Bojanowski [ctb],\n Michel Kuhlmann [ctb],\n Miller Patrick [ctb],\n Nacho Caballero [ctb],\n Nick Salkowski [ctb],\n Niels Richard Hansen [ctb],\n Noam Ross [ctb],\n Obada Mahdi [ctb],\n Pavel N. 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Kamvar [ctb] ()", + "Maintainer": "Yihui Xie ", + "Repository": "CRAN", + "Date/Publication": "2023-01-25 10:20:08 UTC", + "Built": "R 4.2.0; ; 2023-01-26 13:33:19 UTC; unix" + } + }, + "labeling": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "labeling", + "Type": "Package", + "Title": "Axis Labeling", + "Version": "0.4.2", + "Date": "2020-10-15", + "Author": "Justin Talbot,", + "Maintainer": "Nuno Sempere ", + "Description": "Functions which provide a range of axis labeling algorithms. 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They work in\n terminals, in 'Emacs' 'ESS', 'RStudio', 'Windows' 'Rgui' and the\n 'macOS' 'R.app'. The package also provides a 'C++' 'API', that works\n with or without 'Rcpp'.", + "License": "MIT + file LICENSE", + "LazyData": "true", + "URL": "https://github.com/r-lib/progress#readme", + "BugReports": "https://github.com/r-lib/progress/issues", + "Imports": "hms, prettyunits, R6, crayon", + "Suggests": "Rcpp, testthat, withr", + "RoxygenNote": "6.1.0", + "Encoding": "UTF-8", + "NeedsCompilation": "no", + "Packaged": "2019-05-15 20:28:47 UTC; gaborcsardi", + "Repository": "CRAN", + "Date/Publication": "2019-05-16 21:30:03 UTC", + "Built": "R 4.2.0; ; 2022-04-26 08:57:00 UTC; unix" + } + }, + "rappdirs": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Type": "Package", + "Package": "rappdirs", + "Title": "Application Directories: Determine Where to Save Data, Caches,\nand Logs", + "Version": "0.3.3", + "Authors@R": "\n c(person(given = \"Hadley\",\n family = \"Wickham\",\n role = c(\"trl\", \"cre\", \"cph\"),\n email = \"hadley@rstudio.com\"),\n person(given = \"RStudio\",\n role = \"cph\"),\n person(given = \"Sridhar\",\n family = \"Ratnakumar\",\n role = \"aut\"),\n person(given = \"Trent\",\n family = \"Mick\",\n role = \"aut\"),\n person(given = \"ActiveState\",\n role = \"cph\",\n comment = \"R/appdir.r, R/cache.r, R/data.r, R/log.r translated from appdirs\"),\n person(given = \"Eddy\",\n family = \"Petrisor\",\n role = \"ctb\"),\n person(given = \"Trevor\",\n family = \"Davis\",\n role = c(\"trl\", \"aut\")),\n person(given = \"Gabor\",\n family = \"Csardi\",\n role = \"ctb\"),\n person(given = \"Gregory\",\n family = \"Jefferis\",\n role = \"ctb\"))", + "Description": "An easy way to determine which directories on the\n users computer you should use to save data, caches and logs. A port of\n Python's 'Appdirs' () to\n R.", + "License": "MIT + file LICENSE", + "URL": "https://rappdirs.r-lib.org, https://github.com/r-lib/rappdirs", + "BugReports": "https://github.com/r-lib/rappdirs/issues", + "Depends": "R (>= 3.2)", + "Suggests": "roxygen2, testthat (>= 3.0.0), covr, withr", + "Copyright": "Original python appdirs module copyright (c) 2010\nActiveState Software Inc. R port copyright Hadley Wickham,\nRStudio. See file LICENSE for details.", + "Encoding": "UTF-8", + "RoxygenNote": "7.1.1", + "Config/testthat/edition": "3", + "NeedsCompilation": "yes", + "Packaged": "2021-01-28 22:29:57 UTC; hadley", + "Author": "Hadley Wickham [trl, cre, cph],\n RStudio [cph],\n Sridhar Ratnakumar [aut],\n Trent Mick [aut],\n ActiveState [cph] (R/appdir.r, R/cache.r, R/data.r, R/log.r translated\n from appdirs),\n Eddy Petrisor [ctb],\n Trevor Davis [trl, aut],\n Gabor Csardi [ctb],\n Gregory Jefferis [ctb]", + "Maintainer": "Hadley Wickham ", + "Repository": "CRAN", + "Date/Publication": "2021-01-31 05:40:02 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2022-04-25 03:07:40 UTC; unix", + "Archs": "rappdirs.so.dSYM" + } + }, + "readr": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "readr", + "Title": "Read Rectangular Text Data", + "Version": "2.1.4", + "Authors@R": "c(\n person(\"Hadley\", \"Wickham\", , \"hadley@posit.co\", role = \"aut\"),\n person(\"Jim\", \"Hester\", role = \"aut\"),\n person(\"Romain\", \"Francois\", role = \"ctb\"),\n person(\"Jennifer\", \"Bryan\", , \"jenny@posit.co\", role = c(\"aut\", \"cre\"),\n comment = c(ORCID = \"0000-0002-6983-2759\")),\n person(\"Shelby\", \"Bearrows\", role = \"ctb\"),\n person(\"Posit, PBC\", role = c(\"cph\", \"fnd\")),\n person(\"https://github.com/mandreyel/\", role = \"cph\",\n comment = \"mio library\"),\n person(\"Jukka\", \"Jylänki\", role = c(\"ctb\", \"cph\"),\n comment = \"grisu3 implementation\"),\n person(\"Mikkel\", \"Jørgensen\", role = c(\"ctb\", \"cph\"),\n comment = \"grisu3 implementation\")\n )", + "Description": "The goal of 'readr' is to provide a fast and friendly way to\n read rectangular data (like 'csv', 'tsv', and 'fwf'). 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When calling\n into 'Python', R data types are automatically converted to their equivalent 'Python'\n types. When values are returned from 'Python' to R they are converted back to R\n types. Compatible with all versions of 'Python' >= 2.7.", + "License": "Apache License 2.0", + "URL": "https://rstudio.github.io/reticulate/,\nhttps://github.com/rstudio/reticulate", + "BugReports": "https://github.com/rstudio/reticulate/issues", + "SystemRequirements": "Python (>= 2.7.0)", + "Encoding": "UTF-8", + "Depends": "R (>= 3.0)", + "Imports": "Matrix, Rcpp (>= 0.12.7), RcppTOML, graphics, here, jsonlite,\nmethods, png, rappdirs, utils, withr", + "Suggests": "callr, knitr, rlang, rmarkdown, testthat", + "LinkingTo": "Rcpp", + "RoxygenNote": "7.2.3", + "VignetteBuilder": "knitr", + "NeedsCompilation": "yes", + "Packaged": "2023-01-07 18:20:58 UTC; tomasz", + "Author": "Tomasz Kalinowski [ctb, cre],\n Kevin Ushey [aut],\n JJ Allaire [aut],\n RStudio [cph, fnd],\n Yuan Tang [aut, cph] (),\n Dirk Eddelbuettel [ctb, cph],\n Bryan Lewis [ctb, cph],\n Sigrid Keydana [ctb],\n Ryan Hafen [ctb, cph],\n Marcus Geelnard [ctb, cph] (TinyThread library,\n http://tinythreadpp.bitsnbites.eu/)", + "Maintainer": "Tomasz Kalinowski ", + "Repository": "CRAN", + "Date/Publication": "2023-01-07 19:30:02 UTC", + "Built": "R 4.2.0; 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lionel", + "Author": "Lionel Henry [aut, cre],\n Hadley Wickham [aut],\n mikefc [cph] (Hash implementation based on Mike's xxhashlite),\n Yann Collet [cph] (Author of the embedded xxHash library),\n Posit, PBC [cph, fnd]", + "Maintainer": "Lionel Henry ", + "Repository": "CRAN", + "Date/Publication": "2023-03-14 08:20:06 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2023-03-14 17:14:27 UTC; unix" + } + }, + "rmarkdown": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Type": "Package", + "Package": "rmarkdown", + "Title": "Dynamic Documents for R", + "Version": "2.20", + "Authors@R": "c(\n person(\"JJ\", \"Allaire\", , \"jj@rstudio.com\", role = \"aut\"),\n person(\"Yihui\", \"Xie\", , \"xie@yihui.name\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0003-0645-5666\")),\n person(\"Jonathan\", \"McPherson\", , \"jonathan@rstudio.com\", role = \"aut\"),\n person(\"Javier\", \"Luraschi\", , \"javier@rstudio.com\", role = \"aut\"),\n person(\"Kevin\", \"Ushey\", , \"kevin@rstudio.com\", role = \"aut\"),\n person(\"Aron\", \"Atkins\", , \"aron@rstudio.com\", role = \"aut\"),\n person(\"Hadley\", \"Wickham\", , \"hadley@rstudio.com\", role = \"aut\"),\n person(\"Joe\", \"Cheng\", , \"joe@rstudio.com\", role = \"aut\"),\n person(\"Winston\", \"Chang\", , \"winston@rstudio.com\", role = \"aut\"),\n person(\"Richard\", \"Iannone\", , \"rich@rstudio.com\", role = \"aut\", comment = c(ORCID = \"0000-0003-3925-190X\")),\n person(\"Andrew\", \"Dunning\", role = \"ctb\", comment = c(ORCID = \"0000-0003-0464-5036\")),\n person(\"Atsushi\", \"Yasumoto\", role = c(\"ctb\", \"cph\"), comment = c(ORCID = \"0000-0002-8335-495X\", cph = \"Number sections Lua filter\")),\n person(\"Barret\", \"Schloerke\", role = \"ctb\"),\n person(\"Carson\", \"Sievert\", role = \"ctb\", comment = c(ORCID = \"0000-0002-4958-2844\")), \n person(\"Christophe\", \"Dervieux\", role = \"ctb\"),\n person(\"Devon\", \"Ryan\", , \"dpryan79@gmail.com\", role = \"ctb\", comment = c(ORCID = \"0000-0002-8549-0971\")),\n person(\"Frederik\", \"Aust\", , \"frederik.aust@uni-koeln.de\", role = \"ctb\", comment = c(ORCID = \"0000-0003-4900-788X\")),\n person(\"Jeff\", \"Allen\", , \"jeff@rstudio.com\", role = \"ctb\"), \n person(\"JooYoung\", \"Seo\", role = \"ctb\", comment = c(ORCID = \"0000-0002-4064-6012\")),\n person(\"Malcolm\", \"Barrett\", role = \"ctb\"),\n person(\"Rob\", \"Hyndman\", , \"Rob.Hyndman@monash.edu\", role = \"ctb\"),\n person(\"Romain\", \"Lesur\", role = \"ctb\"),\n person(\"Roy\", \"Storey\", role = \"ctb\"),\n person(\"Ruben\", \"Arslan\", , \"ruben.arslan@uni-goettingen.de\", role = \"ctb\"),\n person(\"Sergio\", \"Oller\", role = \"ctb\"),\n person(, \"RStudio, PBC\", role = \"cph\"),\n person(, \"jQuery UI contributors\", role = c(\"ctb\", \"cph\"), comment = \"jQuery UI library; 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yihui", + "Author": "JJ Allaire [aut],\n Yihui Xie [aut, cre] (),\n Jonathan McPherson [aut],\n Javier Luraschi [aut],\n Kevin Ushey [aut],\n Aron Atkins [aut],\n Hadley Wickham [aut],\n Joe Cheng [aut],\n Winston Chang [aut],\n Richard Iannone [aut] (),\n Andrew Dunning [ctb] (),\n Atsushi Yasumoto [ctb, cph] (,\n Number sections Lua filter),\n Barret Schloerke [ctb],\n Carson Sievert [ctb] (),\n Christophe Dervieux [ctb],\n Devon Ryan [ctb] (),\n Frederik Aust [ctb] (),\n Jeff Allen [ctb],\n JooYoung Seo [ctb] (),\n Malcolm Barrett [ctb],\n Rob Hyndman [ctb],\n Romain Lesur [ctb],\n Roy Storey [ctb],\n Ruben Arslan [ctb],\n Sergio Oller [ctb],\n RStudio, PBC [cph],\n jQuery UI contributors [ctb, cph] (jQuery UI library; authors listed in\n inst/rmd/h/jqueryui-AUTHORS.txt),\n Mark Otto [ctb] (Bootstrap library),\n Jacob Thornton [ctb] (Bootstrap library),\n Bootstrap contributors [ctb] (Bootstrap library),\n Twitter, Inc [cph] (Bootstrap library),\n Alexander Farkas [ctb, cph] (html5shiv library),\n Scott Jehl [ctb, cph] (Respond.js library),\n Ivan Sagalaev [ctb, cph] (highlight.js library),\n Greg Franko [ctb, cph] (tocify library),\n John MacFarlane [ctb, cph] (Pandoc templates),\n Google, Inc. 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With this,\n R developers can use variables, inheritance, and functions to generate\n dynamic style sheets. The package uses the 'Sass CSS' extension language,\n which is stable, powerful, and CSS compatible.", + "Authors@R": "c(\n person(\"Joe\", \"Cheng\", , \"joe@rstudio.com\", \"aut\"),\n person(\"Timothy\", \"Mastny\", , \"tim.mastny@gmail.com\", \"aut\"),\n person(\"Richard\", \"Iannone\", , \"rich@rstudio.com\", \"aut\",\n comment = c(ORCID = \"0000-0003-3925-190X\")),\n person(\"Barret\", \"Schloerke\", , \"barret@rstudio.com\", \"aut\",\n comment = c(ORCID = \"0000-0001-9986-114X\")),\n person(\"Carson\", \"Sievert\", , \"carson@rstudio.com\", c(\"aut\", \"cre\"),\n comment = c(ORCID = \"0000-0002-4958-2844\")),\n person(\"Christophe\", \"Dervieux\", , \"cderv@rstudio.com\", c(\"ctb\"),\n comment = c(ORCID = \"0000-0003-4474-2498\")),\n person(family = \"RStudio\", role = c(\"cph\", \"fnd\")),\n person(family = \"Sass Open Source Foundation\", role = c(\"ctb\", \"cph\"),\n comment = \"LibSass library\"),\n person(\"Greter\", \"Marcel\", role = c(\"ctb\", \"cph\"),\n comment = \"LibSass library\"),\n person(\"Mifsud\", \"Michael\", role = c(\"ctb\", \"cph\"),\n comment = \"LibSass library\"),\n person(\"Hampton\", \"Catlin\", role = c(\"ctb\", \"cph\"),\n comment = \"LibSass library\"),\n person(\"Natalie\", \"Weizenbaum\", role = c(\"ctb\", \"cph\"),\n comment = \"LibSass library\"),\n person(\"Chris\", \"Eppstein\", role = c(\"ctb\", \"cph\"),\n comment = \"LibSass library\"),\n person(\"Adams\", \"Joseph\", role = c(\"ctb\", \"cph\"),\n comment = \"json.cpp\"),\n person(\"Trifunovic\", \"Nemanja\", role = c(\"ctb\", \"cph\"),\n comment = \"utf8.h\")\n )", + "License": "MIT + file LICENSE", + "URL": "https://rstudio.github.io/sass/, https://github.com/rstudio/sass", + "BugReports": "https://github.com/rstudio/sass/issues", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.3", + "SystemRequirements": "GNU make", + "Imports": "fs, rlang (>= 0.4.10), htmltools (>= 0.5.1), R6, rappdirs", + "Suggests": "testthat, knitr, rmarkdown, withr, shiny, curl", + "VignetteBuilder": "knitr", + "Config/testthat/edition": "3", + "NeedsCompilation": "yes", + "Packaged": "2023-01-23 19:37:40 UTC; cpsievert", + "Author": "Joe Cheng [aut],\n Timothy Mastny [aut],\n Richard Iannone [aut] (),\n Barret Schloerke [aut] (),\n Carson Sievert [aut, cre] (),\n Christophe Dervieux [ctb] (),\n RStudio [cph, fnd],\n Sass Open Source Foundation [ctb, cph] (LibSass library),\n Greter Marcel [ctb, cph] (LibSass library),\n Mifsud Michael [ctb, cph] (LibSass library),\n Hampton Catlin [ctb, cph] (LibSass library),\n Natalie Weizenbaum [ctb, cph] (LibSass library),\n Chris Eppstein [ctb, cph] (LibSass library),\n Adams Joseph [ctb, cph] (json.cpp),\n Trifunovic Nemanja [ctb, cph] (utf8.h)", + "Maintainer": "Carson Sievert ", + "Repository": "CRAN", + "Date/Publication": "2023-01-24 01:10:02 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2023-01-24 13:29:04 UTC; unix", + "Archs": "sass.so.dSYM" + } + }, + "scales": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "scales", + "Title": "Scale Functions for Visualization", + "Version": "1.2.1", + "Authors@R": "c(\n person(\"Hadley\", \"Wickham\", , \"hadley@rstudio.com\", role = c(\"aut\", \"cre\")),\n person(\"Dana\", \"Seidel\", role = \"aut\"),\n person(\"RStudio\", role = c(\"cph\", \"fnd\"))\n )", + "Description": "Graphical scales map data to aesthetics, and provide methods\n for automatically determining breaks and labels for axes and legends.", + "License": "MIT + file LICENSE", + "URL": "https://scales.r-lib.org, https://github.com/r-lib/scales", + "BugReports": "https://github.com/r-lib/scales/issues", + "Depends": "R (>= 3.2)", + "Imports": "farver (>= 2.0.3), labeling, lifecycle, munsell (>= 0.5), R6,\nRColorBrewer, rlang (>= 1.0.0), viridisLite", + "Suggests": "bit64, covr, dichromat, ggplot2, hms (>= 0.5.0), stringi,\ntestthat (>= 3.0.0), waldo (>= 0.4.0)", + "Config/Needs/website": "tidyverse/tidytemplate", + "Encoding": "UTF-8", + "LazyLoad": "yes", + "RoxygenNote": "7.2.1", + "Config/testthat/edition": "3", + "NeedsCompilation": "no", + "Packaged": "2022-08-19 15:35:49 UTC; hadleywickham", + "Author": "Hadley Wickham [aut, cre],\n Dana Seidel [aut],\n RStudio [cph, fnd]", + "Maintainer": "Hadley Wickham ", + "Repository": "CRAN", + "Date/Publication": "2022-08-20 00:10:11 UTC", + "Built": "R 4.2.0; ; 2022-08-20 12:31:35 UTC; unix" + } + }, + "stringi": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "stringi", + "Version": "1.7.12", + "Date": "2023-01-09", + "Title": "Fast and Portable Character String Processing Facilities", + "Description": "A collection of character string/text/natural language\n processing tools for pattern searching (e.g., with 'Java'-like regular\n expressions or the 'Unicode' collation algorithm), random string generation,\n case mapping, string transliteration, concatenation, sorting, padding,\n wrapping, Unicode normalisation, date-time formatting and parsing,\n and many more. They are fast, consistent, convenient, and -\n thanks to 'ICU' (International Components for Unicode) -\n portable across all locales and platforms. Documentation about 'stringi' is\n provided via its website at and\n the paper by Gagolewski (2022, ).", + "URL": "https://stringi.gagolewski.com/,\nhttps://github.com/gagolews/stringi, https://icu.unicode.org/", + "BugReports": "https://github.com/gagolews/stringi/issues", + "SystemRequirements": "C++11, ICU4C (>= 55, optional)", + "Type": "Package", + "Depends": "R (>= 3.1)", + "Imports": "tools, utils, stats", + "Biarch": "TRUE", + "License": "file LICENSE", + "Author": "Marek Gagolewski [aut, cre, cph] (),\n Bartek Tartanus [ctb], and others (stringi source code);\n Unicode, Inc. and others (ICU4C source code, Unicode Character Database)", + "Maintainer": "Marek Gagolewski ", + "RoxygenNote": "7.2.1", + "Encoding": "UTF-8", + "NeedsCompilation": "yes", + "Packaged": "2023-01-09 07:28:38 UTC; gagolews", + "License_is_FOSS": "yes", + "Repository": "CRAN", + "Date/Publication": "2023-01-11 10:10:02 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2023-01-12 12:40:07 UTC; unix" + } + }, + "stringr": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "stringr", + "Title": "Simple, Consistent Wrappers for Common String Operations", + "Version": "1.5.0", + "Authors@R": "\n c(person(given = \"Hadley\",\n family = \"Wickham\",\n role = c(\"aut\", \"cre\", \"cph\"),\n email = \"hadley@rstudio.com\"),\n person(given = \"RStudio\",\n role = c(\"cph\", \"fnd\")))", + "Description": "A consistent, simple and easy to use set of wrappers around\n the fantastic 'stringi' package. All function and argument names (and\n positions) are consistent, all functions deal with \"NA\"'s and zero\n length vectors in the same way, and the output from one function is\n easy to feed into the input of another.", + "License": "MIT + file LICENSE", + "URL": "https://stringr.tidyverse.org,\nhttps://github.com/tidyverse/stringr", + "BugReports": "https://github.com/tidyverse/stringr/issues", + "Depends": "R (>= 3.3)", + "Imports": "cli, glue (>= 1.6.1), lifecycle (>= 1.0.3), magrittr, rlang\n(>= 1.0.0), stringi (>= 1.5.3), vctrs", + "Suggests": "covr, htmltools, htmlwidgets, knitr, rmarkdown, testthat (>=\n3.0.0)", + "VignetteBuilder": "knitr", + "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "LazyData": "true", + "RoxygenNote": "7.2.1", + "NeedsCompilation": "no", + "Packaged": "2022-12-01 20:53:42 UTC; hadleywickham", + "Author": "Hadley Wickham [aut, cre, cph],\n RStudio [cph, fnd]", + "Maintainer": "Hadley Wickham ", + "Repository": "CRAN", + "Date/Publication": "2022-12-02 10:20:02 UTC", + "Built": "R 4.2.0; ; 2022-12-03 13:12:02 UTC; unix" + } + }, + "tibble": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "tibble", + "Title": "Simple Data Frames", + "Version": "3.2.1", + "Authors@R": "\n c(person(given = \"Kirill\",\n family = \"M\\u00fcller\",\n role = c(\"aut\", \"cre\"),\n email = \"kirill@cynkra.com\",\n comment = c(ORCID = \"0000-0002-1416-3412\")),\n person(given = \"Hadley\",\n family = \"Wickham\",\n role = \"aut\",\n email = \"hadley@rstudio.com\"),\n person(given = \"Romain\",\n family = \"Francois\",\n role = \"ctb\",\n email = \"romain@r-enthusiasts.com\"),\n person(given = \"Jennifer\",\n family = \"Bryan\",\n role = \"ctb\",\n email = \"jenny@rstudio.com\"),\n person(given = \"RStudio\",\n role = c(\"cph\", \"fnd\")))", + "Description": "Provides a 'tbl_df' class (the 'tibble') with stricter checking and better formatting than the traditional\n data frame.", + "License": "MIT + file LICENSE", + "URL": "https://tibble.tidyverse.org/, https://github.com/tidyverse/tibble", + "BugReports": "https://github.com/tidyverse/tibble/issues", + "Depends": "R (>= 3.4.0)", + "Imports": "fansi (>= 0.4.0), lifecycle (>= 1.0.0), magrittr, methods,\npillar (>= 1.8.1), pkgconfig, rlang (>= 1.0.2), utils, vctrs\n(>= 0.4.2)", + "Suggests": "bench, bit64, blob, brio, callr, cli, covr, crayon (>=\n1.3.4), DiagrammeR, dplyr, evaluate, formattable, ggplot2,\nhere, hms, htmltools, knitr, lubridate, mockr, nycflights13,\npkgbuild, pkgload, purrr, rmarkdown, stringi, testthat (>=\n3.0.2), tidyr, withr", + "VignetteBuilder": "knitr", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.3", + "Config/testthat/edition": "3", + "Config/testthat/parallel": "true", + "Config/testthat/start-first": "vignette-formats, as_tibble, add,\ninvariants", + "Config/autostyle/scope": "line_breaks", + "Config/autostyle/strict": "true", + "Config/autostyle/rmd": "false", + "Config/Needs/website": "tidyverse/tidytemplate", + "NeedsCompilation": "yes", + "Packaged": "2023-03-19 09:23:10 UTC; kirill", + "Author": "Kirill Müller [aut, cre] (),\n Hadley Wickham [aut],\n Romain Francois [ctb],\n Jennifer Bryan [ctb],\n RStudio [cph, fnd]", + "Maintainer": "Kirill Müller ", + "Repository": "CRAN", + "Date/Publication": "2023-03-20 06:30:02 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2023-03-21 12:55:49 UTC; unix", + "Archs": "tibble.so.dSYM" + } + }, + "tidyselect": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "tidyselect", + "Title": "Select from a Set of Strings", + "Version": "1.2.0", + "Authors@R": "c(\n person(\"Lionel\", \"Henry\", , \"lionel@rstudio.com\", role = c(\"aut\", \"cre\")),\n person(\"Hadley\", \"Wickham\", , \"hadley@rstudio.com\", role = \"aut\"),\n person(\"RStudio\", role = c(\"cph\", \"fnd\"))\n )", + "Description": "A backend for the selecting functions of the 'tidyverse'. It\n makes it easy to implement select-like functions in your own packages\n in a way that is consistent with other 'tidyverse' interfaces for\n selection.", + "License": "MIT + file LICENSE", + "URL": "https://tidyselect.r-lib.org, https://github.com/r-lib/tidyselect", + "BugReports": "https://github.com/r-lib/tidyselect/issues", + "Depends": "R (>= 3.4)", + "Imports": "cli (>= 3.3.0), glue (>= 1.3.0), lifecycle (>= 1.0.3), rlang\n(>= 1.0.4), vctrs (>= 0.4.1), withr", + "Suggests": "covr, crayon, dplyr, knitr, magrittr, rmarkdown, stringr,\ntestthat (>= 3.1.1), tibble (>= 2.1.3)", + "VignetteBuilder": "knitr", + "ByteCompile": "true", + "Config/testthat/edition": "3", + "Config/Needs/website": "tidyverse/tidytemplate", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.1", + "NeedsCompilation": "no", + "Packaged": "2022-10-10 14:09:03 UTC; hadleywickham", + "Author": "Lionel Henry [aut, cre],\n Hadley Wickham [aut],\n RStudio [cph, fnd]", + "Maintainer": "Lionel Henry ", + "Repository": "CRAN", + "Date/Publication": "2022-10-10 19:00:02 UTC", + "Built": "R 4.2.0; ; 2022-10-11 12:13:21 UTC; unix" + } + }, + "tinytex": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "tinytex", + "Type": "Package", + "Title": "Helper Functions to Install and Maintain TeX Live, and Compile\nLaTeX Documents", + "Version": "0.44", + "Authors@R": "c(\n person(\"Yihui\", \"Xie\", role = c(\"aut\", \"cre\", \"cph\"), email = \"xie@yihui.name\", comment = c(ORCID = \"0000-0003-0645-5666\")),\n person(family = \"RStudio, PBC\", role = \"cph\"),\n person(\"Christophe\", \"Dervieux\", role = \"ctb\", comment = c(ORCID = \"0000-0003-4474-2498\")),\n person(\"Devon\", \"Ryan\", role = \"ctb\", email = \"dpryan79@gmail.com\", comment = c(ORCID = \"0000-0002-8549-0971\")),\n person(\"Ethan\", \"Heinzen\", role = \"ctb\"),\n person(\"Fernando\", \"Cagua\", role = \"ctb\"),\n person()\n )", + "Description": "Helper functions to install and maintain the 'LaTeX' distribution\n named 'TinyTeX' (), a lightweight, cross-platform,\n portable, and easy-to-maintain version of 'TeX Live'. This package also\n contains helper functions to compile 'LaTeX' documents, and install missing\n 'LaTeX' packages automatically.", + "Imports": "xfun (>= 0.29)", + "Suggests": "testit, rstudioapi", + "License": "MIT + file LICENSE", + "URL": "https://github.com/rstudio/tinytex", + "BugReports": "https://github.com/rstudio/tinytex/issues", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.3", + "NeedsCompilation": "no", + "Packaged": "2023-02-01 18:14:05 UTC; yihui", + "Author": "Yihui Xie [aut, cre, cph] (),\n RStudio, PBC [cph],\n Christophe Dervieux [ctb] (),\n Devon Ryan [ctb] (),\n Ethan Heinzen [ctb],\n Fernando Cagua [ctb]", + "Maintainer": "Yihui Xie ", + "Repository": "CRAN", + "Date/Publication": "2023-02-01 19:00:02 UTC", + "Built": "R 4.2.0; ; 2023-02-02 13:09:51 UTC; unix" + } + }, + "tzdb": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "tzdb", + "Title": "Time Zone Database Information", + "Version": "0.3.0", + "Authors@R": "c(\n person(\"Davis\", \"Vaughan\", , \"davis@rstudio.com\", role = c(\"aut\", \"cre\")),\n person(\"Howard\", \"Hinnant\", role = \"cph\",\n comment = \"Author of the included date library\"),\n person(\"RStudio\", role = c(\"cph\", \"fnd\"))\n )", + "Description": "Provides an up-to-date copy of the Internet Assigned Numbers\n Authority (IANA) Time Zone Database. It is updated periodically to\n reflect changes made by political bodies to time zone boundaries, UTC\n offsets, and daylight saving time rules. Additionally, this package\n provides a C++ interface for working with the 'date' library. 'date'\n provides comprehensive support for working with dates and date-times,\n which this package exposes to make it easier for other R packages to\n utilize. Headers are provided for calendar specific calculations,\n along with a limited interface for time zone manipulations.", + "License": "MIT + file LICENSE", + "URL": "https://tzdb.r-lib.org, https://github.com/r-lib/tzdb", + "BugReports": "https://github.com/r-lib/tzdb/issues", + "Depends": "R (>= 3.4.0)", + "Suggests": "covr, testthat (>= 3.0.0)", + "LinkingTo": "cpp11 (>= 0.4.2)", + "Biarch": "yes", + "Config/Needs/website": "tidyverse/tidytemplate", + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "RoxygenNote": "7.1.2", + "SystemRequirements": "C++11", + "NeedsCompilation": "yes", + "Packaged": "2022-03-28 13:59:28 UTC; davis", + "Author": "Davis Vaughan [aut, cre],\n Howard Hinnant [cph] (Author of the included date library),\n RStudio [cph, fnd]", + "Maintainer": "Davis Vaughan ", + "Repository": "CRAN", + "Date/Publication": "2022-03-28 15:00:02 UTC", + "Built": "R 4.2.0; x86_64-apple-darwin17.0; 2022-04-25 03:24:59 UTC; unix", + "Archs": "tzdb.so.dSYM" + } + }, + "utf8": { + "Source": "CRAN", + "Repository": "https://cloud.r-project.org", + "description": { + "Package": "utf8", + "Title": "Unicode Text Processing", + "Version": "1.2.3", + "Authors@R": "\n c(person(given = c(\"Patrick\", \"O.\"),\n family = \"Perry\",\n role = c(\"aut\", \"cph\")),\n person(given = \"Kirill\",\n family = \"M\\u00fcller\",\n role = \"cre\",\n email = \"kirill@cynkra.com\"),\n person(given = \"Unicode, Inc.\",\n role = c(\"cph\", \"dtc\"),\n comment = \"Unicode Character Database\"))", + "Description": "Process and print 'UTF-8' encoded international\n text (Unicode). Input, validate, normalize, encode, format, and\n display.", + "License": "Apache License (== 2.0) | file LICENSE", + "URL": "https://ptrckprry.com/r-utf8/, https://github.com/patperry/r-utf8", + "BugReports": "https://github.com/patperry/r-utf8/issues", + "Depends": "R (>= 2.10)", + "Suggests": "cli, covr, knitr, rlang, rmarkdown, testthat (>= 3.0.0),\nwithr", + "VignetteBuilder": "knitr, rmarkdown", + "Config/testthat/edition": "3", + "Encoding": "UTF-8", + "RoxygenNote": "7.2.3", + "NeedsCompilation": "yes", + "Packaged": "2023-01-31 05:28:43 UTC; kirill", + "Author": "Patrick O. Perry [aut, cph],\n Kirill Müller [cre],\n Unicode, Inc. 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similarity index 69% rename from rmarkdown-notebook/renv/.gitignore rename to reticulated-rmarkdown-notebook/renv/.gitignore index 2129631..6ae4167 100644 --- a/rmarkdown-notebook/renv/.gitignore +++ b/reticulated-rmarkdown-notebook/renv/.gitignore @@ -1,3 +1,5 @@ +cellar/ +sandbox/ library/ local/ lock/ diff --git a/rmarkdown-notebook/renv/activate.R b/reticulated-rmarkdown-notebook/renv/activate.R similarity index 59% rename from rmarkdown-notebook/renv/activate.R rename to reticulated-rmarkdown-notebook/renv/activate.R index 304fd90..360dd52 100644 --- a/rmarkdown-notebook/renv/activate.R +++ b/reticulated-rmarkdown-notebook/renv/activate.R @@ -2,32 +2,50 @@ local({ # the requested version of renv - version <- "0.14.0" + version <- "0.17.0" # the project directory project <- getwd() - # allow environment variable to control activation - activate <- Sys.getenv("RENV_ACTIVATE_PROJECT") - if (!nzchar(activate)) { + # figure out whether the autoloader is enabled + enabled <- local({ - # don't auto-activate when R CMD INSTALL is running - if (nzchar(Sys.getenv("R_INSTALL_PKG"))) - return(FALSE) + # first, check config option + override <- getOption("renv.config.autoloader.enabled") + if (!is.null(override)) + return(override) - } + # next, check environment variables + # TODO: prefer using the configuration one in the future + envvars <- c( + "RENV_CONFIG_AUTOLOADER_ENABLED", + "RENV_AUTOLOADER_ENABLED", + "RENV_ACTIVATE_PROJECT" + ) + + for (envvar in envvars) { + envval <- Sys.getenv(envvar, unset = NA) + if (!is.na(envval)) + return(tolower(envval) %in% c("true", "t", "1")) + } - # bail if activation was explicitly disabled - if (tolower(activate) %in% c("false", "f", "0")) + # enable by default + TRUE + + }) + + if (!enabled) return(FALSE) # avoid recursion - if (nzchar(Sys.getenv("RENV_R_INITIALIZING"))) + if (identical(getOption("renv.autoloader.running"), TRUE)) { + warning("ignoring recursive attempt to run renv autoloader") return(invisible(TRUE)) + } # signal that we're loading renv during R startup - Sys.setenv("RENV_R_INITIALIZING" = "true") - on.exit(Sys.unsetenv("RENV_R_INITIALIZING"), add = TRUE) + options(renv.autoloader.running = TRUE) + on.exit(options(renv.autoloader.running = NULL), add = TRUE) # signal that we've consented to use renv options(renv.consent = TRUE) @@ -36,21 +54,15 @@ local({ # mask 'utils' packages, will come first on the search path library(utils, lib.loc = .Library) - # check to see if renv has already been loaded - if ("renv" %in% loadedNamespaces()) { - - # if renv has already been loaded, and it's the requested version of renv, - # nothing to do - spec <- .getNamespaceInfo(.getNamespace("renv"), "spec") - if (identical(spec[["version"]], version)) - return(invisible(TRUE)) - - # otherwise, unload and attempt to load the correct version of renv + # unload renv if it's already been loaded + if ("renv" %in% loadedNamespaces()) unloadNamespace("renv") - } - # load bootstrap tools + `%||%` <- function(x, y) { + if (is.environment(x) || length(x)) x else y + } + bootstrap <- function(version, library) { # attempt to download renv @@ -76,9 +88,17 @@ local({ if (!is.na(repos)) return(repos) + # check for lockfile repositories + repos <- tryCatch(renv_bootstrap_repos_lockfile(), error = identity) + if (!inherits(repos, "error") && length(repos)) + return(repos) + # if we're testing, re-use the test repositories - if (renv_bootstrap_tests_running()) - return(getOption("renv.tests.repos")) + if (renv_bootstrap_tests_running()) { + repos <- getOption("renv.tests.repos") + if (!is.null(repos)) + return(repos) + } # retrieve current repos repos <- getOption("repos") @@ -100,6 +120,30 @@ local({ } + renv_bootstrap_repos_lockfile <- function() { + + lockpath <- Sys.getenv("RENV_PATHS_LOCKFILE", unset = "renv.lock") + if (!file.exists(lockpath)) + return(NULL) + + lockfile <- tryCatch(renv_json_read(lockpath), error = identity) + if (inherits(lockfile, "error")) { + warning(lockfile) + return(NULL) + } + + repos <- lockfile$R$Repositories + if (length(repos) == 0) + return(NULL) + + keys <- vapply(repos, `[[`, "Name", FUN.VALUE = character(1)) + vals <- vapply(repos, `[[`, "URL", FUN.VALUE = character(1)) + names(vals) <- keys + + return(vals) + + } + renv_bootstrap_download <- function(version) { # if the renv version number has 4 components, assume it must @@ -107,16 +151,20 @@ local({ nv <- numeric_version(version) components <- unclass(nv)[[1]] - methods <- if (length(components) == 4L) { - list( + # if this appears to be a development version of 'renv', we'll + # try to restore from github + dev <- length(components) == 4L + + # begin collecting different methods for finding renv + methods <- c( + renv_bootstrap_download_tarball, + if (dev) renv_bootstrap_download_github - ) - } else { - list( + else c( renv_bootstrap_download_cran_latest, renv_bootstrap_download_cran_archive ) - } + ) for (method in methods) { path <- tryCatch(method(version), error = identity) @@ -140,43 +188,80 @@ local({ if (fixup) mode <- "w+b" - utils::download.file( + args <- list( url = url, destfile = destfile, mode = mode, quiet = TRUE ) + if ("headers" %in% names(formals(utils::download.file))) + args$headers <- renv_bootstrap_download_custom_headers(url) + + do.call(utils::download.file, args) + + } + + renv_bootstrap_download_custom_headers <- function(url) { + + headers <- getOption("renv.download.headers") + if (is.null(headers)) + return(character()) + + if (!is.function(headers)) + stopf("'renv.download.headers' is not a function") + + headers <- headers(url) + if (length(headers) == 0L) + return(character()) + + if (is.list(headers)) + headers <- unlist(headers, recursive = FALSE, use.names = TRUE) + + ok <- + is.character(headers) && + is.character(names(headers)) && + all(nzchar(names(headers))) + + if (!ok) + stop("invocation of 'renv.download.headers' did not return a named character vector") + + headers + } renv_bootstrap_download_cran_latest <- function(version) { spec <- renv_bootstrap_download_cran_latest_find(version) + type <- spec$type + repos <- spec$repos message("* Downloading renv ", version, " ... ", appendLF = FALSE) - type <- spec$type - repos <- spec$repos + baseurl <- utils::contrib.url(repos = repos, type = type) + ext <- if (identical(type, "source")) + ".tar.gz" + else if (Sys.info()[["sysname"]] == "Windows") + ".zip" + else + ".tgz" + name <- sprintf("renv_%s%s", version, ext) + url <- paste(baseurl, name, sep = "/") - info <- tryCatch( - utils::download.packages( - pkgs = "renv", - destdir = tempdir(), - repos = repos, - type = type, - quiet = TRUE - ), + destfile <- file.path(tempdir(), name) + status <- tryCatch( + renv_bootstrap_download_impl(url, destfile), condition = identity ) - if (inherits(info, "condition")) { + if (inherits(status, "condition")) { message("FAILED") return(FALSE) } # report success and return message("OK (downloaded ", type, ")") - info[1, 2] + destfile } @@ -253,6 +338,41 @@ local({ } + renv_bootstrap_download_tarball <- function(version) { + + # if the user has provided the path to a tarball via + # an environment variable, then use it + tarball <- Sys.getenv("RENV_BOOTSTRAP_TARBALL", unset = NA) + if (is.na(tarball)) + return() + + # allow directories + if (dir.exists(tarball)) { + name <- sprintf("renv_%s.tar.gz", version) + tarball <- file.path(tarball, name) + } + + # bail if it doesn't exist + if (!file.exists(tarball)) { + + # let the user know we weren't able to honour their request + fmt <- "* RENV_BOOTSTRAP_TARBALL is set (%s) but does not exist." + msg <- sprintf(fmt, tarball) + warning(msg) + + # bail + return() + + } + + fmt <- "* Bootstrapping with tarball at path '%s'." + msg <- sprintf(fmt, tarball) + message(msg) + + tarball + + } + renv_bootstrap_download_github <- function(version) { enabled <- Sys.getenv("RENV_BOOTSTRAP_FROM_GITHUB", unset = "TRUE") @@ -306,7 +426,13 @@ local({ bin <- R.home("bin") exe <- if (Sys.info()[["sysname"]] == "Windows") "R.exe" else "R" r <- file.path(bin, exe) - args <- c("--vanilla", "CMD", "INSTALL", "-l", shQuote(library), shQuote(tarball)) + + args <- c( + "--vanilla", "CMD", "INSTALL", "--no-multiarch", + "-l", shQuote(path.expand(library)), + shQuote(path.expand(tarball)) + ) + output <- system2(r, args, stdout = TRUE, stderr = TRUE) message("Done!") @@ -499,18 +625,33 @@ local({ renv_bootstrap_library_root <- function(project) { + prefix <- renv_bootstrap_profile_prefix() + path <- Sys.getenv("RENV_PATHS_LIBRARY", unset = NA) if (!is.na(path)) - return(path) + return(paste(c(path, prefix), collapse = "/")) - path <- Sys.getenv("RENV_PATHS_LIBRARY_ROOT", unset = NA) - if (!is.na(path)) { + path <- renv_bootstrap_library_root_impl(project) + if (!is.null(path)) { name <- renv_bootstrap_library_root_name(project) - return(file.path(path, name)) + return(paste(c(path, prefix, name), collapse = "/")) } - prefix <- renv_bootstrap_profile_prefix() - paste(c(project, prefix, "renv/library"), collapse = "/") + renv_bootstrap_paths_renv("library", project = project) + + } + + renv_bootstrap_library_root_impl <- function(project) { + + root <- Sys.getenv("RENV_PATHS_LIBRARY_ROOT", unset = NA) + if (!is.na(root)) + return(root) + + type <- renv_bootstrap_project_type(project) + if (identical(type, "package")) { + userdir <- renv_bootstrap_user_dir() + return(file.path(userdir, "library")) + } } @@ -520,8 +661,8 @@ local({ if (version == loadedversion) return(TRUE) - # assume four-component versions are from GitHub; three-component - # versions are from CRAN + # assume four-component versions are from GitHub; + # three-component versions are from CRAN components <- strsplit(loadedversion, "[.-]")[[1]] remote <- if (length(components) == 4L) paste("rstudio/renv", loadedversion, sep = "@") @@ -561,6 +702,12 @@ local({ # warn if the version of renv loaded does not match renv_bootstrap_validate_version(version) + # execute renv load hooks, if any + hooks <- getHook("renv::autoload") + for (hook in hooks) + if (is.function(hook)) + tryCatch(hook(), error = warning) + # load the project renv::load(project) @@ -576,7 +723,7 @@ local({ return(profile) # check for a profile file (nothing to do if it doesn't exist) - path <- file.path(project, "renv/local/profile") + path <- renv_bootstrap_paths_renv("profile", profile = FALSE, project = project) if (!file.exists(path)) return(NULL) @@ -587,7 +734,7 @@ local({ # set RENV_PROFILE profile <- contents[[1L]] - if (nzchar(profile)) + if (!profile %in% c("", "default")) Sys.setenv(RENV_PROFILE = profile) profile @@ -597,7 +744,7 @@ local({ renv_bootstrap_profile_prefix <- function() { profile <- renv_bootstrap_profile_get() if (!is.null(profile)) - return(file.path("renv/profiles", profile)) + return(file.path("profiles", profile, "renv")) } renv_bootstrap_profile_get <- function() { @@ -621,6 +768,211 @@ local({ profile } + + renv_bootstrap_path_absolute <- function(path) { + + substr(path, 1L, 1L) %in% c("~", "/", "\\") || ( + substr(path, 1L, 1L) %in% c(letters, LETTERS) && + substr(path, 2L, 3L) %in% c(":/", ":\\") + ) + + } + + renv_bootstrap_paths_renv <- function(..., profile = TRUE, project = NULL) { + renv <- Sys.getenv("RENV_PATHS_RENV", unset = "renv") + root <- if (renv_bootstrap_path_absolute(renv)) NULL else project + prefix <- if (profile) renv_bootstrap_profile_prefix() + components <- c(root, renv, prefix, ...) + paste(components, collapse = "/") + } + + renv_bootstrap_project_type <- function(path) { + + descpath <- file.path(path, "DESCRIPTION") + if (!file.exists(descpath)) + return("unknown") + + desc <- tryCatch( + read.dcf(descpath, all = TRUE), + error = identity + ) + + if (inherits(desc, "error")) + return("unknown") + + type <- desc$Type + if (!is.null(type)) + return(tolower(type)) + + package <- desc$Package + if (!is.null(package)) + return("package") + + "unknown" + + } + + renv_bootstrap_user_dir <- function() { + dir <- renv_bootstrap_user_dir_impl() + path.expand(chartr("\\", "/", dir)) + } + + renv_bootstrap_user_dir_impl <- function() { + + # use local override if set + override <- getOption("renv.userdir.override") + if (!is.null(override)) + return(override) + + # use R_user_dir if available + tools <- asNamespace("tools") + if (is.function(tools$R_user_dir)) + return(tools$R_user_dir("renv", "cache")) + + # try using our own backfill for older versions of R + envvars <- c("R_USER_CACHE_DIR", "XDG_CACHE_HOME") + for (envvar in envvars) { + root <- Sys.getenv(envvar, unset = NA) + if (!is.na(root)) + return(file.path(root, "R/renv")) + } + + # use platform-specific default fallbacks + if (Sys.info()[["sysname"]] == "Windows") + file.path(Sys.getenv("LOCALAPPDATA"), "R/cache/R/renv") + else if (Sys.info()[["sysname"]] == "Darwin") + "~/Library/Caches/org.R-project.R/R/renv" + else + "~/.cache/R/renv" + + } + + + renv_json_read <- function(file = NULL, text = NULL) { + + jlerr <- NULL + + # if jsonlite is loaded, use that instead + if ("jsonlite" %in% loadedNamespaces()) { + + json <- catch(renv_json_read_jsonlite(file, text)) + if (!inherits(json, "error")) + return(json) + + jlerr <- json + + } + + # otherwise, fall back to the default JSON reader + json <- catch(renv_json_read_default(file, text)) + if (!inherits(json, "error")) + return(json) + + # report an error + if (!is.null(jlerr)) + stop(jlerr) + else + stop(json) + + } + + renv_json_read_jsonlite <- function(file = NULL, text = NULL) { + text <- paste(text %||% read(file), collapse = "\n") + jsonlite::fromJSON(txt = text, simplifyVector = FALSE) + } + + renv_json_read_default <- function(file = NULL, text = NULL) { + + # find strings in the JSON + text <- paste(text %||% read(file), collapse = "\n") + pattern <- '["](?:(?:\\\\.)|(?:[^"\\\\]))*?["]' + locs <- gregexpr(pattern, text, perl = TRUE)[[1]] + + # if any are found, replace them with placeholders + replaced <- text + strings <- character() + replacements <- character() + + if (!identical(c(locs), -1L)) { + + # get the string values + starts <- locs + ends <- locs + attr(locs, "match.length") - 1L + strings <- substring(text, starts, ends) + + # only keep those requiring escaping + strings <- grep("[[\\]{}:]", strings, perl = TRUE, value = TRUE) + + # compute replacements + replacements <- sprintf('"\032%i\032"', seq_along(strings)) + + # replace the strings + mapply(function(string, replacement) { + replaced <<- sub(string, replacement, replaced, fixed = TRUE) + }, strings, replacements) + + } + + # transform the JSON into something the R parser understands + transformed <- replaced + transformed <- gsub("{}", "`names<-`(list(), character())", transformed, fixed = TRUE) + transformed <- gsub("[[{]", "list(", transformed, perl = TRUE) + transformed <- gsub("[]}]", ")", transformed, perl = TRUE) + transformed <- gsub(":", "=", transformed, fixed = TRUE) + text <- paste(transformed, collapse = "\n") + + # parse it + json <- parse(text = text, keep.source = FALSE, srcfile = NULL)[[1L]] + + # construct map between source strings, replaced strings + map <- as.character(parse(text = strings)) + names(map) <- as.character(parse(text = replacements)) + + # convert to list + map <- as.list(map) + + # remap strings in object + remapped <- renv_json_remap(json, map) + + # evaluate + eval(remapped, envir = baseenv()) + + } + + renv_json_remap <- function(json, map) { + + # fix names + if (!is.null(names(json))) { + lhs <- match(names(json), names(map), nomatch = 0L) + rhs <- match(names(map), names(json), nomatch = 0L) + names(json)[rhs] <- map[lhs] + } + + # fix values + if (is.character(json)) + return(map[[json]] %||% json) + + # handle true, false, null + if (is.name(json)) { + text <- as.character(json) + if (text == "true") + return(TRUE) + else if (text == "false") + return(FALSE) + else if (text == "null") + return(NULL) + } + + # recurse + if (is.recursive(json)) { + for (i in seq_along(json)) { + json[i] <- list(renv_json_remap(json[[i]], map)) + } + } + + json + + } # load the renv profile, if any renv_bootstrap_profile_load(project) diff --git a/rmarkdown-notebook/renv/settings.dcf b/reticulated-rmarkdown-notebook/renv/settings.dcf similarity index 80% rename from rmarkdown-notebook/renv/settings.dcf rename to reticulated-rmarkdown-notebook/renv/settings.dcf index fc4e479..169d82f 100644 --- a/rmarkdown-notebook/renv/settings.dcf +++ b/reticulated-rmarkdown-notebook/renv/settings.dcf @@ -1,8 +1,10 @@ +bioconductor.version: external.libraries: ignored.packages: package.dependency.fields: Imports, Depends, LinkingTo r.version: snapshot.type: implicit use.cache: TRUE +vcs.ignore.cellar: TRUE vcs.ignore.library: TRUE vcs.ignore.local: TRUE diff --git a/reticulated-rmarkdown-notebook/requirements.txt b/reticulated-rmarkdown-notebook/requirements.txt new file mode 100644 index 0000000..95aa4c7 --- /dev/null +++ b/reticulated-rmarkdown-notebook/requirements.txt @@ -0,0 +1,10 @@ +# requirements.txt generated by rsconnect-python on 2023-03-21 20:59:46.133264 +numpy==1.24.2 +pandas==1.5.3 +pip==23.0.1 +python-dateutil==2.8.2 +pytz==2022.7.1 +setuptools==67.6.0 +six==1.16.0 +wheel==0.40.0 + diff --git a/rmarkdown-notebook/rmarkdown-notebook.Rmd b/reticulated-rmarkdown-notebook/rmarkdown-notebook.Rmd similarity index 92% rename from rmarkdown-notebook/rmarkdown-notebook.Rmd rename to reticulated-rmarkdown-notebook/rmarkdown-notebook.Rmd index 355939f..86e82f0 100644 --- a/rmarkdown-notebook/rmarkdown-notebook.Rmd +++ b/reticulated-rmarkdown-notebook/rmarkdown-notebook.Rmd @@ -1,6 +1,6 @@ --- -title: "The reticulate package" -subtitle: "Integration of Python into R projects" +title: "Reticulated R Markdown" +subtitle: "Calling Python from an R Markdown document" output: html_notebook --- @@ -19,7 +19,6 @@ print(reticulate::py_config()) # From Python to R - ### Use Python to manipulate data ```{python data} diff --git a/rmarkdown-notebook/rmarkdown-notebook.Rproj b/reticulated-rmarkdown-notebook/rmarkdown-notebook.Rproj similarity index 100% rename from rmarkdown-notebook/rmarkdown-notebook.Rproj rename to reticulated-rmarkdown-notebook/rmarkdown-notebook.Rproj diff --git a/rmarkdown-notebook/manifest.json b/rmarkdown-notebook/manifest.json deleted file mode 100644 index a0995e6..0000000 --- a/rmarkdown-notebook/manifest.json +++ /dev/null @@ -1,2126 +0,0 @@ -{ - "version": 1, - "locale": "en_US", - "platform": "4.1.0", - "metadata": { - "appmode": "rmd-static", - "primary_rmd": "rmarkdown-notebook.Rmd", - "primary_html": null, - "content_category": null, - "has_parameters": false - }, - "python": { - "version": "3.8.6", - "package_manager": { - "name": "pip", - "version": "21.2.4", - "package_file": "requirements.txt" - } - }, - "packages": { - "MASS": { - "Source": "CRAN", - "Repository": "https://cran.rstudio.com", - "GithubRepo": null, - "GithubUsername": null, - "GithubRef": null, - "GithubSha1": null, - "description": { - "Package": "MASS", - "Priority": "recommended", - "Version": "7.3-54", - "Date": "2021-04-17", - "Revision": "$Rev: 3542 $", - "Depends": "R (>= 3.3.0), grDevices, graphics, stats, utils", - "Imports": "methods", - "Suggests": "lattice, nlme, nnet, survival", - "Authors@R": "c(person(\"Brian\", \"Ripley\", role = c(\"aut\", \"cre\", \"cph\"),\n email = \"ripley@stats.ox.ac.uk\"),\n\t person(\"Bill\", \"Venables\", role = \"ctb\"),\n\t person(c(\"Douglas\", \"M.\"), \"Bates\", role = \"ctb\"),\n\t person(\"Kurt\", \"Hornik\", role = \"trl\",\n comment = \"partial port ca 1998\"),\n\t person(\"Albrecht\", \"Gebhardt\", role = \"trl\",\n comment = \"partial port ca 1998\"),\n\t person(\"David\", \"Firth\", role = \"ctb\"))", - "Description": "Functions and datasets to support Venables and Ripley,\n \"Modern Applied Statistics with S\" (4th edition, 2002).", - "Title": "Support Functions and Datasets for Venables and Ripley's MASS", - "LazyData": "yes", - "ByteCompile": "yes", - "License": "GPL-2 | GPL-3", - "URL": "http://www.stats.ox.ac.uk/pub/MASS4/", - "Contact": "", - "NeedsCompilation": "yes", - "Packaged": "2021-05-03 08:31:21 UTC; ripley", - "Author": "Brian Ripley [aut, cre, cph],\n Bill Venables [ctb],\n Douglas M. Bates [ctb],\n Kurt Hornik [trl] (partial port ca 1998),\n Albrecht Gebhardt [trl] (partial port ca 1998),\n David Firth [ctb]", - "Maintainer": "Brian Ripley ", - "Repository": "CRAN", - "Date/Publication": "2021-05-03 09:03:25 UTC", - "Built": "R 4.1.0; x86_64-apple-darwin17.0; 2021-05-19 20:55:51 UTC; unix" - } - }, - "Matrix": { - "Source": "CRAN", - "Repository": "https://cran.rstudio.com", - "GithubRepo": null, - "GithubUsername": null, - "GithubRef": null, - "GithubSha1": null, - "description": { - "Package": "Matrix", - "Version": "1.3-4", - "Date": "2021-05-24", - "Priority": "recommended", - "Title": "Sparse and Dense Matrix Classes and Methods", - "Contact": "Doug and Martin ", - "Maintainer": "Martin Maechler ", - "Authors@R": "c(person(\"Douglas\",\"Bates\", role=\"aut\")\n , person(\"Martin\",\"Maechler\", role = c(\"aut\",\"cre\"), email=\"mmaechler+Matrix@gmail.com\",\n comment = c(ORCID = \"0000-0002-8685-9910\"))\n , person(\"Timothy A.\", \"Davis\", role=\"ctb\",\n comment = c(\"SuiteSparse and 'cs' C libraries, notably CHOLMOD, AMD;\n\t\t collaborators listed in\n\t\t\tdir(pattern = '^[A-Z]+[.]txt$', full.names=TRUE,\n\t\t\t system.file('doc', 'SuiteSparse', package='Matrix'))\"))\n , person(\"Jens\", \"Oehlschlägel\", role=\"ctb\", comment=\"initial nearPD()\")\n , person(\"Jason\", \"Riedy\", role=\"ctb\",\n comment = c(\"condest() and onenormest() for octave\",\n \t \t \"Copyright: Regents of the University of California\"))\n , person(\"R Core Team\", role = \"ctb\", comment=\"base R matrix implementation\")\n )", - "Description": "A rich hierarchy of matrix classes, including triangular,\n symmetric, and diagonal matrices, both dense and sparse and with\n pattern, logical and numeric entries. 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Davis [ctb] (SuiteSparse and 'cs' C libraries, notably\n CHOLMOD, AMD; collaborators listed in dir(pattern =\n '^[A-Z]+[.]txt$', full.names=TRUE, system.file('doc',\n 'SuiteSparse', package='Matrix'))),\n Jens Oehlschlägel [ctb] (initial nearPD()),\n Jason Riedy [ctb] (condest() and onenormest() for octave, Copyright:\n Regents of the University of California),\n R Core Team [ctb] (base R matrix implementation)", - "Repository": "CRAN", - "Date/Publication": "2021-06-01 06:10:06 UTC", - "Built": "R 4.1.0; x86_64-apple-darwin17.0; 2021-06-02 12:09:18 UTC; unix" - } - }, - "R6": { - "Source": "CRAN", - "Repository": "https://cran.rstudio.com", - "GithubRepo": null, - "GithubUsername": null, - "GithubRef": null, - "GithubSha1": null, - "description": { - "Package": "R6", - "Title": "Encapsulated Classes with Reference Semantics", - "Version": "2.5.1", - "Authors@R": "person(\"Winston\", \"Chang\", role = c(\"aut\", \"cre\"), email = \"winston@stdout.org\")", - "Description": "Creates classes with reference semantics, similar to R's built-in\n reference classes. Compared to reference classes, R6 classes are simpler\n and lighter-weight, and they are not built on S4 classes so they do not\n require the methods package. These classes allow public and private\n members, and they support inheritance, even when the classes are defined in\n different packages.", - "Depends": "R (>= 3.0)", - "Suggests": "testthat, pryr", - "License": "MIT + file LICENSE", - "URL": "https://r6.r-lib.org, https://github.com/r-lib/R6/", - "BugReports": "https://github.com/r-lib/R6/issues", - "RoxygenNote": "7.1.1", - "NeedsCompilation": "no", - "Packaged": "2021-08-06 20:18:46 UTC; winston", - "Author": "Winston Chang [aut, cre]", - "Maintainer": "Winston Chang ", - "Repository": "CRAN", - "Date/Publication": "2021-08-19 14:00:05 UTC", - "Built": "R 4.1.0; ; 2021-08-19 16:22:14 UTC; unix" - } - }, - "RColorBrewer": { - "Source": "CRAN", - "Repository": "https://cran.rstudio.com", - "GithubRepo": null, - "GithubUsername": null, - "GithubRef": null, - "GithubSha1": null, - "description": { - "Package": "RColorBrewer", - "Version": "1.1-2", - "Date": "2014-12-07", - "Title": "ColorBrewer Palettes", - "Authors@R": "c(person(given = \"Erich\", family = \"Neuwirth\", role = c(\"aut\",\n \"cre\"), email = \"erich.neuwirth@univie.ac.at\"))", - "Author": "Erich Neuwirth [aut, cre]", - "Maintainer": "Erich Neuwirth ", - "Depends": "R (>= 2.0.0)", - "Description": "Provides color schemes for maps (and other graphics)\n designed by Cynthia Brewer as described at http://colorbrewer2.org", - "License": "Apache License 2.0", - "Packaged": "2014-12-06 23:59:42 UTC; neuwirth", - "NeedsCompilation": "no", - "Repository": "RSPM", - "Date/Publication": "2014-12-07 08:28:55", - "Encoding": "UTF-8", - "Built": "R 4.1.0; ; 2021-06-28 13:38:40 UTC; unix" - } - }, - "Rcpp": { - "Source": "CRAN", - "Repository": "https://cran.rstudio.com", - "GithubRepo": null, - "GithubUsername": null, - "GithubRef": null, - "GithubSha1": null, - "description": { - "Package": "Rcpp", - "Title": "Seamless R and C++ Integration", - "Version": "1.0.7", - "Date": "2021-07-06", - "Author": "Dirk Eddelbuettel, Romain Francois, JJ Allaire, Kevin Ushey, Qiang Kou,\n Nathan Russell, Inaki Ucar, Douglas Bates and John Chambers", - "Maintainer": "Dirk Eddelbuettel ", - "Description": "The 'Rcpp' package provides R functions as well as C++ classes which\n offer a seamless integration of R and C++. Many R data types and objects can be\n mapped back and forth to C++ equivalents which facilitates both writing of new\n code as well as easier integration of third-party libraries. 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user193109", - "Author": "JJ Allaire [aut],\n Yihui Xie [aut, cre] (),\n Jonathan McPherson [aut],\n Javier Luraschi [aut],\n Kevin Ushey [aut],\n Aron Atkins [aut],\n Hadley Wickham [aut],\n Joe Cheng [aut],\n Winston Chang [aut],\n Richard Iannone [aut] (),\n Andrew Dunning [ctb] (),\n Atsushi Yasumoto [ctb, cph] (,\n Number sections Lua filter),\n Barret Schloerke [ctb],\n Carson Sievert [ctb] (),\n Christophe Dervieux [ctb],\n Devon Ryan [ctb] (),\n Frederik Aust [ctb] (),\n Jeff Allen [ctb],\n JooYoung Seo [ctb] (),\n Malcolm Barrett [ctb],\n Rob Hyndman [ctb],\n Romain Lesur [ctb],\n Roy Storey [ctb],\n Ruben Arslan [ctb],\n Sergio Oller [ctb],\n RStudio, PBC [cph],\n jQuery Foundation [cph] (jQuery library),\n jQuery contributors [ctb, cph] (jQuery library; authors listed in\n inst/rmd/h/jquery-AUTHORS.txt),\n jQuery UI contributors [ctb, cph] (jQuery UI library; authors listed in\n inst/rmd/h/jqueryui-AUTHORS.txt),\n Mark Otto [ctb] (Bootstrap library),\n Jacob Thornton [ctb] (Bootstrap library),\n Bootstrap contributors [ctb] (Bootstrap library),\n Twitter, Inc [cph] (Bootstrap library),\n Alexander Farkas [ctb, cph] (html5shiv library),\n Scott Jehl [ctb, cph] (Respond.js library),\n Ivan Sagalaev [ctb, cph] (highlight.js library),\n Greg Franko [ctb, cph] (tocify library),\n John MacFarlane [ctb, cph] (Pandoc templates),\n Google, Inc. [ctb, cph] (ioslides library),\n Dave Raggett [ctb] (slidy library),\n W3C [cph] (slidy library),\n Dave Gandy [ctb, cph] (Font-Awesome),\n Ben Sperry [ctb] (Ionicons),\n Drifty [cph] (Ionicons),\n Aidan Lister [ctb, cph] (jQuery StickyTabs),\n Benct Philip Jonsson [ctb, cph] (pagebreak Lua filter),\n Albert Krewinkel [ctb, cph] (pagebreak Lua filter)", - "Built": "R 4.1.0; ; 2021-08-10 13:14:11 UTC; unix" - } - }, - "rprojroot": { - "Source": "CRAN", - "Repository": "https://cran.rstudio.com", - "GithubRepo": null, - "GithubUsername": null, - "GithubRef": null, - "GithubSha1": null, - "description": { - "Package": "rprojroot", - "Title": "Finding Files in Project Subdirectories", - "Version": "2.0.2", - "Authors@R": "\n person(given = \"Kirill\",\n family = \"M\\u00fcller\",\n role = c(\"aut\", \"cre\"),\n email = \"krlmlr+r@mailbox.org\",\n comment = c(ORCID = \"0000-0002-1416-3412\"))", - "Description": "Robust, reliable and flexible paths to files below\n a project root. The 'root' of a project is defined as a directory that\n matches a certain criterion, e.g., it contains a certain regular file.", - "License": "MIT + file LICENSE", - "URL": "https://rprojroot.r-lib.org/, https://github.com/r-lib/rprojroot", - "BugReports": "https://github.com/r-lib/rprojroot/issues", - "Depends": "R (>= 3.0.0)", - "Suggests": "covr, knitr, lifecycle, mockr, rmarkdown, testthat (>=\n3.0.0), withr", - "VignetteBuilder": "knitr", - "Config/testthat/edition": "3", - "Encoding": "UTF-8", - "LazyData": "true", - "RoxygenNote": "7.1.1.9000", - "NeedsCompilation": "no", - "Packaged": "2020-11-15 13:03:34 UTC; kirill", - "Author": "Kirill Müller [aut, cre] ()", - "Maintainer": "Kirill Müller ", - "Repository": "RSPM", - "Date/Publication": "2020-11-15 13:30:03 UTC", - "Built": "R 4.1.0; ; 2021-07-06 17:44:27 UTC; unix" - } - }, - "scales": { - "Source": "CRAN", - "Repository": "https://cran.rstudio.com", - "GithubRepo": null, - "GithubUsername": null, - "GithubRef": null, - "GithubSha1": null, - "description": { - "Package": "scales", - "Title": "Scale Functions for Visualization", - "Version": "1.1.1", - "Authors@R": "\n c(person(given = \"Hadley\",\n family = \"Wickham\",\n role = c(\"aut\", \"cre\"),\n email = \"hadley@rstudio.com\"),\n person(given = \"Dana\",\n family = \"Seidel\",\n role = \"aut\"),\n person(given = \"RStudio\",\n role = \"cph\"))", - "Description": "Graphical scales map data to aesthetics, and\n provide methods for automatically determining breaks and labels for\n axes and legends.", - "License": "MIT + file LICENSE", - "URL": "https://scales.r-lib.org, https://github.com/r-lib/scales", - "BugReports": "https://github.com/r-lib/scales/issues", - "Depends": "R (>= 3.2)", - "Imports": "farver (>= 2.0.3), labeling, lifecycle, munsell (>= 0.5), R6,\nRColorBrewer, viridisLite", - "Suggests": "bit64, covr, dichromat, ggplot2, hms (>= 0.5.0), testthat (>=\n2.1.0)", - "Encoding": "UTF-8", - "LazyLoad": "yes", - "RoxygenNote": "7.1.0", - "NeedsCompilation": "no", - "Packaged": "2020-05-11 14:46:40 UTC; hadley", - "Author": "Hadley Wickham [aut, cre],\n Dana Seidel [aut],\n RStudio [cph]", - "Maintainer": "Hadley Wickham ", - "Repository": "RSPM", - "Date/Publication": "2020-05-11 23:20:05 UTC", - "Built": "R 4.1.0; ; 2021-06-28 13:38:43 UTC; unix" - } - }, - "stringi": { - "Source": "CRAN", - "Repository": "https://cran.rstudio.com", - "GithubRepo": null, - "GithubUsername": null, - "GithubRef": null, - "GithubSha1": null, - "description": { - "Package": "stringi", - "Version": "1.4.6", - "Date": "2020-02-17", - "Title": "Character String Processing Facilities", - "Description": "Fast, correct, consistent, portable and convenient character\n string/text processing in every locale and any native encoding. \n Owing to the use of the 'ICU' (International Components for Unicode) \n library, the package provides 'R' users with platform-independent functions\n known to 'Java', 'Perl', 'Python', 'PHP' and 'Ruby' programmers. Available\n features include: pattern searching (e.g., with 'Java'-like regular\n expressions or the 'Unicode' collation algorithm), random string generation,\n case mapping, string transliteration, concatenation,\n Unicode normalization, date-time formatting and parsing and many more.", - "URL": "http://www.gagolewski.com/software/stringi/\nhttp://site.icu-project.org/ http://www.unicode.org/", - "BugReports": "http://github.com/gagolews/stringi/issues", - "SystemRequirements": "ICU4C (>= 55, optional)", - "Type": "Package", - "Depends": "R (>= 2.14)", - "Imports": "tools, utils, stats", - "Biarch": "TRUE", - "License": "file LICENSE", - "Author": "Marek Gagolewski [aut, cre] (),\n Bartek Tartanus [ctb]\n and other contributors (stringi source code);\n IBM, Unicode, Inc. and other contributors (ICU4C source code);\n Unicode, Inc. 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