Sol Genomics Network

Repositories

• sgn

  The code behind the Sol Genomics Network, Cassavabase and BreeDBase websites

  perl
  PLpgSQL MIT 30 45 392 6 Updated Sep 22, 2020

• DroneImageScripts

  OpenCV scripts
  Python MIT 2 1 0 0 Updated Sep 21, 2020

• breedbase_dockerfile

  The Dockerfiles for breeDBase
  Dockerfile MIT 8 4 5 3 Updated Sep 21, 2020

• SMMID

  Code and content behind smmid.org
  Perl 3 3 0 0 Updated Sep 20, 2020

• bio-chado-loader

  Load biological data into the Chado database with Bio::Chado::Schema

  perl
  Perl 0 1 7 0 Updated Sep 18, 2020

• cxgn-corelibs

  Various Modules relating to SGN

  perl
  Perl 14 11 2 3 Updated Sep 18, 2020

• Phenome

  Scripts and libraries for managing the SGN Phenome database
  Perl 11 10 0 1 Updated Sep 18, 2020

• postgres_dockerfile

  docker file for breedbase postgresql instance
  TSQL 2 0 5 0 Updated Sep 16, 2020

• Tea

  code and database for the expression query, mining, analysis, and visualization tools
  HTML 4 5 8 0 Updated Sep 15, 2020

• Cview

  A comparative genetic map viewer
  Perl 10 12 0 0 Updated Sep 15, 2020

• R_libs

  Compiled R dependencies for Solgenomics & Breedbase databases, for faster install of docker etc.
  C++ MIT 0 0 0 1 Updated Sep 14, 2020

• imagesol

  A skin for the imagesol image processing website
  0 0 0 0 Updated Sep 13, 2020

• BrAPI-js

  JavaScript BrAPI Client with support for asynchronous interdependent calls.

  api-client brapi brapp
  JavaScript 2 4 1 3 Updated Sep 10, 2020

• lycopersicoides_ea

  Files specific to the S. lycopersicoides Expression Atlas
  MIT 0 0 0 0 Updated Sep 3, 2020

• breedbase_portuguese

  This is a version of Breedbase written in Portuguese (Brazilian).
  MIT 0 0 0 0 Updated Aug 30, 2020

• cassbase

  The mason components for the cassbase database, a variation of cassavabase for the CASS project
  Perl MIT 1 0 1 0 Updated Aug 12, 2020

• perl-local-lib

  Git repository for Perl local-lib for faster installs (eg. Dockerfiles)
  Perl 0 0 0 0 Updated Aug 4, 2020

• rPackages

  R packages
  R GPL-2.0 0 0 1 0 Updated Jul 22, 2020

• yapri

  Yet Another Perl R Inteface.
  Perl 3 6 0 1 Updated Jul 13, 2020

• solgenomics

  The mason components needed to run the solgenomics.net website
  MIT 0 0 0 0 Updated Jun 25, 2020

• python_virtual_environment

  For faster Docker image builds
  0 0 0 0 Updated Jun 3, 2020

• nea

  Nicotiana expression atlas
  MIT 0 0 0 0 Updated May 29, 2020

• citrusgreening

  user interface for the citrusgreening site https://citrusgreening.org/
  1 0 30 0 Updated May 27, 2020

• sweetpotatobase

  Web interface for SweetPotatoBase website
  1 0 0 0 Updated May 23, 2020

• musabase
  1 0 0 0 Updated May 22, 2020

• cassava

  Cassavabase - A website for Cassava research
  Perl 1 1 4 0 Updated May 22, 2020

• yambase

  web interface for Yambase database
  1 0 0 0 Updated May 22, 2020

• expression_atlas_docker

  files for creating a docker for the expression atlas
  MIT 0 0 0 0 Updated May 18, 2020

• nelsonlab
  MIT 1 0 0 0 Updated May 10, 2020

• brapi-fieldmap

  editable field map implemented in Brava
  JavaScript 1 1 2 1 Updated Apr 27, 2020