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CSC: Circular Sequence Comparison

Description: Given two sequences x and y, CSC finds the cyclic rotation of x (or an approximation of it) that minimises the blockwise q-gram distance from y.

Installation: To compile CSC, please follow the instructions given in file INSTALL.

Citation:

Roberto Grossi, Costas S. Iliopoulos, Robert Mercas, Nadia Pisanti, Solon P. Pissis, Ahmad Retha, Fatima Vayani: 
Circular Sequence Comparison with q-grams. 
WABI 2015: 203-216.

License: GNU GPLv3 License; Copyright (C) 2015 Solon P. Pissis, Ahmad Retha and Fatima Vayani.

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