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Code to accompany, "A comparison of approaches to improve worst-case predictive model performance over patient subpopulations", by Stephen R. Pfohl, Haoran Zhang, Yizhe Xu, Agata Foryciarz, Marzyeh Ghassemi, Nigam H. Shah

Installation

  1. Pull this repository, and from within the project directory call pip install . or pip install -e . if you intend to modify the code

Package structure

  • The package is structured in three submodules. Further information on each submodule is provided README files within the respective directories.
  • group_robustness_fairness.omop
    • Contains code to reproduce experiments conducted on STARR. Also contains code to generate visualization and tables for the mimic_eicu module
  • group_robustness_fairness.mimic_eicu
    • Contains code to reproduce experiments conducted on MIMIC-III and the eICU database.
  • group_robustness_fairness.prediction_utils
    • Library code with pytorch models and evaluators

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