Current Inspired-Visualization and Evaluation of the TASEP
Branch: master
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Type Name Latest commit message Commit time
Failed to load latest commit information.
CIVET Add Linux version Jun 1, 2018
CIVET_User_Manual.pdf Add input files Jun 1, 2018 Update Jun 11, 2018


CIVET (Current Inspired-Visualization and Evaluation of the TASEP) is a software package that provides a visualization of the dynamics associated with the generalized Totally Asymmetric Simple Exclusion Process (TASEP).

CIVET has been developed in Python 3.6. It uses the packages numpy and pyqtgraph, which requires pyqt4 or pyqt5. For ease of installation, we provide an executable version of the software that does not require having Python and the required add-on packages installed. A separate open-source version will be made available in the future. We provide different versions of CIVET for Mac OS X, Linux (Ubuntu 18.04) and Windows. The software has been mainly tested on Mac. It works best with a scroll-wheel mouse.

Please take a look at the user manual "CIVET_User_Manual.pdf" for further details.

Wonjun Son
Dan D. Erdmann-Pham
Khanh Dao Duc
Yun S. Song

University of California, Berkeley