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Tools (:py:mod:`indra.tools`)

Run assembly components in a pipeline (:py:mod:`indra.tools.assemble_corpus`)

.. automodule:: indra.tools.assemble_corpus
    :members:

Build a network from a gene list (:py:mod:`indra.tools.gene_network`)

.. automodule:: indra.tools.gene_network
    :members:

Build an executable model from a fragment of a large network (:py:mod:`indra.tools.executable_subnetwork`)

.. automodule:: indra.tools.executable_subnetwork
    :members:

Build a model incrementally over time (:py:mod:`indra.tools.incremental_model`)

.. automodule:: indra.tools.incremental_model
    :members:

The RAS Machine (:py:mod:`indra.tools.machine`)

.. automodule:: indra.tools.machine
    :members: