execute doctests in our continuous integration setup #897

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ctb opened this issue Feb 8, 2020 · 2 comments

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good first issue

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ctb commented Feb 8, 2020

some results from #889 make me wonder - more soon.

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luizirber commented Feb 8, 2020

Oops, apparently not. Seems to be missing --doctest-modules in pytest.ini:
https://github.com/dib-lab/sourmash/blob/a1eeab17ed424c35d58f0d1dc74420eb246d70a4/pytest.ini#L2

ctb changed the title ~~are doctests run by CI?~~ execute doctests in our continuous integration setup

ctb added the good first issue label

Contributor Author

ctb commented Mar 4, 2021

I believe this now involves modifying the [tool:pytest] section of setup.cfg to have --doctest-modules.

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