MetaMSD: Meta analysis for Mass Spectrometry Data MetaMSD integrates quantitative proteomic results from multiple experiments.
This repository contains a MetaMSD manual, a MetaMSD Rscript (in MetaMSD folder), and example datasets (in Data folder). The Data folder contains the followings:
- Two thousands simulated datasets and example simulation R code,
- Kidney Transplant proteomic data including preprocess details, MetaMSD input files, protein quantification information, and an example R script that converts MSstats outputs to MetaMSD inputs, and
- Breast Cancer proteomic data including preprocess details, MetaMSD input files, and protein quantification data.