Sparks lab, Laboratory of Structural Bioinformatics
- Griffith University
- https://sparks-lab.org/
- yaoqi.zhou@gmail.com
Popular repositories
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RNAcmap_standalone
RNAcmap_standalone PublicForked from tcgriffith/RNAcmap-1
A Fully Automatic Method for Predicting Contact Maps of RNAs by Evolutionary Coupling Analysis
Perl 1
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CODA
CODA PublicForked from zh3zh/CODA
This is the method CODA(covariation-induced deviation of activity) introduced in the paper "Accurate inference of the full base-pairing structure of RNA by deep mutational scanning and covariation-…
Roff
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SPOT-RNA
SPOT-RNA PublicForked from jaswindersingh2/SPOT-RNA
SPOT-RNA: RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.
Perl
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RNA-BRiQ
RNA-BRiQ PublicForked from Jian-Zhan/RNA-BRiQ
Robust RNA structure refinement by a nucleobase-centric sampling algorithm coupled with a backbone rotameric and quantum-mechanical-energy-scaled base-base knowledge-based potential
C++
Repositories
- SPOT-RNA-2D Public Forked from jaswindersingh2/SPOT-RNA-2D
SPOT-RNA-2D: Predicting RNA distance-based contact maps by integrated deep learning on physics-inferred base-pairing and evolutionary-derived coupling
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- RNA-BRiQ Public Forked from Jian-Zhan/RNA-BRiQ
Robust RNA structure refinement by a nucleobase-centric sampling algorithm coupled with a backbone rotameric and quantum-mechanical-energy-scaled base-base knowledge-based potential
- RNAcmap_standalone Public Forked from tcgriffith/RNAcmap-1
A Fully Automatic Method for Predicting Contact Maps of RNAs by Evolutionary Coupling Analysis
- SPOT-RNA Public Forked from jaswindersingh2/SPOT-RNA
SPOT-RNA: RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.
- CODA Public Forked from zh3zh/CODA
This is the method CODA(covariation-induced deviation of activity) introduced in the paper "Accurate inference of the full base-pairing structure of RNA by deep mutational scanning and covariation-induced deviation of activity".
-
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