2020-11-17 11:24:12,725 DEBUG [circus.shared.parser] Creating a Circus Parser for datafile D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data.dat 2020-11-17 11:24:12,740 DEBUG [circus.shared.probes] Reading the probe file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\probes.prb 2020-11-17 11:24:12,742 DEBUG [circus.shared.parser] Removing dead channels {1: [0, 1, 2, 3], 4: [12], 6: [23], 8: [31]} 2020-11-17 11:24:12,742 DEBUG [circus.shared.parser] Cluster not detected, so using global /tmp folder 2020-11-17 11:24:12,743 DEBUG [circus.shared.parser] Hanning filtering is activated 2020-11-17 11:24:12,743 DEBUG [circus.shared.parser] Trying to read file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data.dat as raw_binary 2020-11-17 11:24:12,744 DEBUG [circus.files.datafile] data_dtype is read from the params with a value of int16 2020-11-17 11:24:12,744 DEBUG [circus.files.datafile] sampling_rate is read from the params with a value of 32000.0 2020-11-17 11:24:12,744 DEBUG [circus.files.datafile] nb_channels is read from the params with a value of 32 2020-11-17 11:24:12,744 DEBUG [circus.files.datafile] dtype_offset is not set and has the default value of auto 2020-11-17 11:24:12,744 DEBUG [circus.files.datafile] data_offset is not set and has the default value of 0 2020-11-17 11:24:12,744 DEBUG [circus.files.datafile] gain is not set and has the default value of 1.0 2020-11-17 11:24:12,744 DEBUG [circus.files.datafile] data type offset for int16 is automatically set to 0 2020-11-17 11:24:12,744 DEBUG [circus.shared.parser] Changing all values in the param depending on the rate 2020-11-17 11:24:12,745 DEBUG [circus.shared.parser] Trying to read file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data.dat as raw_binary 2020-11-17 11:24:12,745 DEBUG [circus.files.datafile] data_dtype is read from the params with a value of int16 2020-11-17 11:24:12,745 DEBUG [circus.files.datafile] sampling_rate is read from the params with a value of 32000.0 2020-11-17 11:24:12,745 DEBUG [circus.files.datafile] nb_channels is read from the params with a value of 32 2020-11-17 11:24:12,745 DEBUG [circus.files.datafile] dtype_offset is not set and has the default value of auto 2020-11-17 11:24:12,745 DEBUG [circus.files.datafile] data_offset is not set and has the default value of 0 2020-11-17 11:24:12,745 DEBUG [circus.files.datafile] gain is not set and has the default value of 1.0 2020-11-17 11:24:12,745 DEBUG [circus.files.datafile] data type offset for int16 is automatically set to 0 2020-11-17 11:24:12,746 INFO [circus.shared.files] Number of recorded channels : 32 2020-11-17 11:24:12,746 INFO [circus.shared.files] Number of analyzed channels : 25 2020-11-17 11:24:12,746 INFO [circus.shared.files] File format : RAW_BINARY 2020-11-17 11:24:12,746 INFO [circus.shared.files] Data type : int16 2020-11-17 11:24:12,746 INFO [circus.shared.files] Sampling rate : 32000 Hz 2020-11-17 11:24:12,746 INFO [circus.shared.files] Duration of the recording : 7 min 6 s 352 ms 2020-11-17 11:24:12,746 INFO [circus.shared.files] Width of the templates : 3 ms 2020-11-17 11:24:12,746 INFO [circus.shared.files] Spatial radius considered : 100 um 2020-11-17 11:24:12,746 INFO [circus.shared.files] Threshold crossing : negative 2020-11-17 11:24:12,746 DEBUG [circus.shared.mpi] MPI detected: ('Intel MPI', (2019, 0, 8)) 2020-11-17 11:24:14,563 DEBUG [circus.filtering] Initializing the filtering step... 2020-11-17 11:24:14,563 DEBUG [circus.filtering] Reading the input file... 2020-11-17 11:24:14,563 DEBUG [circus.shared.parser] Trying to read file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data.dat as raw_binary 2020-11-17 11:24:14,563 DEBUG [circus.files.datafile] data_dtype is read from the params with a value of int16 2020-11-17 11:24:14,563 DEBUG [circus.files.datafile] sampling_rate is read from the params with a value of 32000.0 2020-11-17 11:24:14,563 DEBUG [circus.files.datafile] nb_channels is read from the params with a value of 32 2020-11-17 11:24:14,563 DEBUG [circus.files.datafile] dtype_offset is not set and has the default value of auto 2020-11-17 11:24:14,563 DEBUG [circus.files.datafile] data_offset is not set and has the default value of 0 2020-11-17 11:24:14,563 DEBUG [circus.files.datafile] gain is not set and has the default value of 1.0 2020-11-17 11:24:14,564 DEBUG [circus.files.datafile] data type offset for int16 is automatically set to 0 2020-11-17 11:24:14,564 DEBUG [circus.shared.parser] Changing all values in the param depending on the rate 2020-11-17 11:24:15,246 DEBUG [circus.shared.mpi] MPI detected: ('Intel MPI', (2019, 0, 8)) 2020-11-17 11:24:16,638 DEBUG [circus.shared.mpi] Setting data chunk size to 30 second 2020-11-17 11:24:16,639 DEBUG [circus.whitening] Analyzing data to get whitening matrices and thresholds... 2020-11-17 11:24:16,639 DEBUG [circus.files.datafile] There are 14 chunks of size 960000 2020-11-17 11:24:16,639 DEBUG [circus.files.datafile] The last chunk has size 203264 2020-11-17 11:24:19,059 DEBUG [circus.whitening] Found 30s to compute the whitening matrix... 2020-11-17 11:24:19,061 DEBUG [circus.whitening] Because of whitening, need to recompute the thresholds... 2020-11-17 11:24:21,274 DEBUG [circus.shared.mpi] Setting data chunk size to 30.4537 second 2020-11-17 11:24:21,274 DEBUG [circus.whitening] Searching spikes to construct the PCA basis... 2020-11-17 11:24:21,274 DEBUG [circus.files.datafile] There are 14 chunks of size 974518 2020-11-17 11:24:21,274 DEBUG [circus.files.datafile] The last chunk has size 12 2020-11-17 11:24:21,303 DEBUG [circus.whitening] Node 13 has collected 0 waveforms 2020-11-17 11:24:24,002 DEBUG [circus.whitening] Node 11 has collected 2281 waveforms 2020-11-17 11:24:24,088 DEBUG [circus.whitening] Node 4 has collected 2418 waveforms 2020-11-17 11:24:24,136 DEBUG [circus.whitening] Node 9 has collected 2769 waveforms 2020-11-17 11:24:24,216 DEBUG [circus.whitening] Node 2 has collected 3111 waveforms 2020-11-17 11:24:24,242 DEBUG [circus.whitening] Node 7 has collected 3070 waveforms 2020-11-17 11:24:24,246 DEBUG [circus.whitening] Node 8 has collected 2817 waveforms 2020-11-17 11:24:24,287 DEBUG [circus.whitening] Node 3 has collected 2684 waveforms 2020-11-17 11:24:24,296 DEBUG [circus.whitening] Node 12 has collected 2872 waveforms 2020-11-17 11:24:24,300 DEBUG [circus.whitening] Node 10 has collected 2825 waveforms 2020-11-17 11:24:24,306 DEBUG [circus.whitening] Node 5 has collected 3356 waveforms 2020-11-17 11:24:24,562 DEBUG [circus.whitening] Node 6 has collected 3600 waveforms 2020-11-17 11:24:24,774 DEBUG [circus.whitening] Node 1 has collected 2941 waveforms 2020-11-17 11:24:26,264 DEBUG [circus.whitening] Node 0 has collected 5398 waveforms 2020-11-17 11:24:26,281 DEBUG [circus.whitening] Found 40142 waveforms over 199990 requested 2020-11-17 11:24:26,679 INFO [circus.whitening] A basis with 5 dimensions has been built 2020-11-17 11:24:26,680 DEBUG [circus.whitening] The percentage of variance explained is 0.5892365427949616 for negative spikes 2020-11-17 11:24:26,978 DEBUG [circus.shared.mpi] MPI detected: ('Intel MPI', (2019, 0, 8)) 2020-11-17 11:24:29,292 DEBUG [circus.shared.mpi] Setting data chunk size to 30.4537 second 2020-11-17 11:24:29,307 DEBUG [circus.files.datafile] There are 14 chunks of size 974518 2020-11-17 11:24:29,307 DEBUG [circus.files.datafile] The last chunk has size 12 2020-11-17 11:24:29,308 DEBUG [circus.clustering] Searching isolated random spikes to sample amplitudes... 2020-11-17 11:24:34,841 DEBUG [circus.clustering] Node 10 has collected 2825 spikes and rejected 0 spikes 2020-11-17 11:24:34,841 DEBUG [circus.clustering] Node 1 has collected 2752 spikes and rejected 0 spikes 2020-11-17 11:24:34,841 DEBUG [circus.clustering] Node 3 has ignored 12739 noisy spikes -11-17 11:24:34,841 DEBUG [circus.clustering] Node 6 has ignored 11788 noisy spikes 2020-11-17 11:24:34,841 DEBUG [circus.clustering] Node 13 has ignored 11308 noisy spikes 2020-11-17 11:24:34,841 DEBUG [circus.clustering] Node 1 has ignored 12149 noisy spikes 2020-11-17 11:24:34,842 DEBUG [circus.clustering] Found 39336 spikes over 199990 requested 2020-11-17 11:24:34,852 DEBUG [circus.clustering] Estimating amplitudes distributions... 2020-11-17 11:24:34,856 DEBUG [circus.clustering] Smart search is actived on channel 2 2020-11-17 11:24:34,856 DEBUG [circus.clustering] Smart search is actived on channel 7 2020-11-17 11:24:34,856 DEBUG [circus.clustering] Smart search is actived on channel 5 2020-11-17 11:24:34,857 DEBUG [circus.clustering] Smart search is actived on channel 11 2020-11-17 11:24:34,857 DEBUG [circus.clustering] Smart search is actived on channel 3 2020-11-17 11:24:34,857 DEBUG [circus.clustering] Smart search is actived on channel 1 2020-11-17 11:24:34,857 DEBUG [circus.clustering] Smart search is actived on channel 4 2020-11-17 11:24:34,857 DEBUG [circus.clustering] Smart search is actived on channel 8 2020-11-17 11:24:34,857 DEBUG [circus.clustering] Smart search is actived on channel 10 2020-11-17 11:24:34,858 DEBUG [circus.clustering] Smart search is actived on channel 6 2020-11-17 11:24:34,859 DEBUG [circus.clustering] Smart search is actived on channel 0 2020-11-17 11:24:34,860 DEBUG [circus.clustering] Smart search is actived on channel 16 2020-11-17 11:24:34,862 DEBUG [circus.clustering] Smart search is actived on channel 21 2020-11-17 11:24:34,862 DEBUG [circus.clustering] Smart search is actived on channel 23 2020-11-17 11:24:34,862 DEBUG [circus.clustering] Smart search is actived on channel 19 2020-11-17 11:24:34,862 DEBUG [circus.clustering] Smart search is actived on channel 15 2020-11-17 11:24:34,862 DEBUG [circus.clustering] Smart search is actived on channel 24 2020-11-17 11:24:34,862 DEBUG [circus.clustering] Smart search is actived on channel 22 2020-11-17 11:24:34,863 DEBUG [circus.clustering] Smart search is actived on channel 17 2020-11-17 11:24:34,863 DEBUG [circus.clustering] Smart search is actived on channel 18 2020-11-17 11:24:34,863 DEBUG [circus.clustering] Smart search is actived on channel 13 2020-11-17 11:24:34,865 DEBUG [circus.clustering] Smart search is actived on channel 20 2020-11-17 11:24:34,865 DEBUG [circus.clustering] Smart search is actived on channel 14 2020-11-17 11:24:34,867 DEBUG [circus.clustering] Smart Search of good isolated spikes for the clustering (1/3)... 2020-11-17 11:24:34,872 DEBUG [circus.clustering] Node 10 found not enough spikes: searching only 2825 spikes instead of 14285 2020-11-17 11:24:34,872 DEBUG [circus.clustering] Node 11 found not enough spikes: searching only 2567 spikes instead of 14285 2020-11-17 11:24:34,872 DEBUG [circus.clustering] Node 12 found not enough spikes: searching only 2766 spikes instead of 14285 2020-11-17 11:24:34,872 DEBUG [circus.clustering] Node 6 found not enough spikes: searching only 3525 spikes instead of 14285 2020-11-17 11:24:34,872 DEBUG [circus.clustering] Node 0 found not enough spikes: searching only 5255 spikes instead of 14285 2020-11-17 11:24:34,872 DEBUG [circus.clustering] Node 2 found not enough spikes: searching only 2711 spikes instead of 14285 2020-11-17 11:24:34,872 DEBUG [circus.clustering] Node 1 found not enough spikes: searching only 2752 spikes instead of 14285 2020-11-17 11:24:34,872 DEBUG [circus.clustering] Node 13 found not enough spikes: searching only 3044 spikes instead of 14285 2020-11-17 11:24:41,382 DEBUG [circus.clustering] Node 5 has collected 2245 spikes and rejected 0 spikes 2020-11-17 11:24:41,382 DEBUG [circus.clustering] Node 1 has collected 2752 spikes and rejected 0 spikes 2020-11-17 11:24:41,382 DEBUG [circus.clustering] Node 4 has ignored 11373 noisy spikes jected 0 spikes 2020-11-17 11:24:41,382 DEBUG [circus.clustering] Node 7 has ignored 10998 noisy spikes 2020-11-17 11:24:41,382 DEBUG [circus.clustering] Node 13 has ignored 11307 noisy spikes 2020-11-17 11:24:41,382 DEBUG [circus.clustering] Node 6 has ignored 11796 noisy spikes 2020-11-17 11:24:41,382 DEBUG [circus.clustering] Found 39336 isolated spikes over 199990 requested (0 rejected) 2020-11-17 11:24:41,403 DEBUG [circus.clustering] Computing density estimations... 2020-11-17 11:24:41,410 DEBUG [circus.clustering] Node 2 will use temp file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data\data\tmp\tmpfg23kig3.hdf5 2020-11-17 11:24:41,410 DEBUG [circus.clustering] Node 8 will use temp file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data\data\tmp\tmpjd39wx44.hdf5 2020-11-17 11:24:41,411 DEBUG [circus.clustering] Node 11 will use temp file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data\data\tmp\tmp66dubhlw.hdf5 2020-11-17 11:24:41,411 DEBUG [circus.clustering] Node 9 will use temp file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data\data\tmp\tmp099z603y.hdf5 2020-11-17 11:24:41,411 DEBUG [circus.clustering] Node 5 will use temp file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data\data\tmp\tmp8y1f9jw9.hdf5 2020-11-17 11:24:41,411 DEBUG [circus.clustering] The variance explained by local PCA on electrode 2 from 544 neg spikes is 0.7018 with 10 dimensions 2020-11-17 11:24:41,411 DEBUG [circus.clustering] The variance explained by local PCA on electrode 9 from 1207 neg spikes is 0.839819 with 10 dimensions 2020-11-17 11:24:41,411 DEBUG [circus.clustering] The variance explained by local PCA on electrode 8 from 2010 neg spikes is 0.807471 with 10 dimensions 2020-11-17 11:24:41,412 DEBUG [circus.clustering] The variance explained by local PCA on electrode 11 from 798 neg spikes is 0.782578 with 10 dimensions 2020-11-17 11:24:41,412 DEBUG [circus.clustering] The variance explained by local PCA on electrode 5 from 1264 neg spikes is 0.707826 with 10 dimensions 2020-11-17 11:24:41,423 DEBUG [circus.clustering] Node 12 will use temp file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data\data\tmp\tmpomjpbfr4.hdf5 2020-11-17 11:24:41,423 DEBUG [circus.clustering] Node 0 will use temp file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data\data\tmp\tmpaif50cqm.hdf5 2020-11-17 11:24:41,424 DEBUG [circus.clustering] Node 7 will use temp file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data\data\tmp\tmpt0sos2r_.hdf5 2020-11-17 11:24:41,424 DEBUG [circus.clustering] Node 3 will use temp file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data\data\tmp\tmpafta7st5.hdf5 2020-11-17 11:24:41,424 DEBUG [circus.clustering] Node 10 will use temp file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data\data\tmp\tmpjmyefio1.hdf5 2020-11-17 11:24:41,424 DEBUG [circus.clustering] Node 13 will use temp file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data\data\tmp\tmpuugmrr67.hdf5 2020-11-17 11:24:41,424 DEBUG [circus.clustering] Node 1 will use temp file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data\data\tmp\tmpepdmbxwz.hdf5 2020-11-17 11:24:41,424 DEBUG [circus.clustering] Node 6 will use temp file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data\data\tmp\tmpbrso1om8.hdf5 2020-11-17 11:24:41,424 DEBUG [circus.clustering] The variance explained by local PCA on electrode 12 from 697 neg spikes is 0.836968 with 10 dimensions 2020-11-17 11:24:41,425 DEBUG [circus.clustering] The variance explained by local PCA on electrode 0 from 732 neg spikes is 0.691762 with 10 dimensions 2020-11-17 11:24:41,425 DEBUG [circus.clustering] The variance explained by local PCA on electrode 7 from 872 neg spikes is 0.682437 with 10 dimensions 2020-11-17 11:24:41,425 DEBUG [circus.clustering] The variance explained by local PCA on electrode 3 from 847 neg spikes is 0.76106 with 10 dimensions 2020-11-17 11:24:41,425 DEBUG [circus.clustering] The variance explained by local PCA on electrode 10 from 740 neg spikes is 0.899802 with 10 dimensions 2020-11-17 11:24:41,425 DEBUG [circus.clustering] The variance explained by local PCA on electrode 1 from 499 neg spikes is 0.853995 with 10 dimensions 2020-11-17 11:24:41,425 DEBUG [circus.clustering] The variance explained by local PCA on electrode 13 from 701 neg spikes is 0.778321 with 10 dimensions 2020-11-17 11:24:41,427 DEBUG [circus.clustering] The variance explained by local PCA on electrode 6 from 2161 neg spikes is 0.72164 with 10 dimensions 2020-11-17 11:24:41,452 DEBUG [circus.clustering] The variance explained by local PCA on electrode 16 from 993 neg spikes is 0.849692 with 10 dimensions 2020-11-17 11:24:41,461 DEBUG [circus.clustering] The variance explained by local PCA on electrode 15 from 1685 neg spikes is 0.844322 with 10 dimensions 2020-11-17 11:24:41,489 DEBUG [circus.clustering] The variance explained by local PCA on electrode 24 from 1704 neg spikes is 0.831751 with 10 dimensions 2020-11-17 11:24:41,490 DEBUG [circus.clustering] The variance explained by local PCA on electrode 14 from 1384 neg spikes is 0.818766 with 10 dimensions 2020-11-17 11:24:41,510 DEBUG [circus.clustering] The variance explained by local PCA on electrode 17 from 3555 neg spikes is 0.839009 with 10 dimensions 2020-11-17 11:24:41,516 DEBUG [circus.clustering] The variance explained by local PCA on electrode 21 from 2591 neg spikes is 0.694109 with 10 dimensions 2020-11-17 11:24:41,525 DEBUG [circus.clustering] The variance explained by local PCA on electrode 18 from 4366 neg spikes is 0.701758 with 10 dimensions 2020-11-17 11:24:41,563 DEBUG [circus.clustering] The variance explained by local PCA on electrode 23 from 2356 neg spikes is 0.878604 with 10 dimensions 2020-11-17 11:24:41,582 DEBUG [circus.clustering] The variance explained by local PCA on electrode 19 from 3532 neg spikes is 0.701896 with 10 dimensions 2020-11-17 11:24:41,811 DEBUG [circus.clustering] The variance explained by local PCA on electrode 22 from 1347 neg spikes is 0.828362 with 10 dimensions 2020-11-17 11:24:42,184 DEBUG [circus.clustering] The variance explained by local PCA on electrode 20 from 1777 neg spikes is 0.721537 with 10 dimensions 2020-11-17 11:24:43,384 DEBUG [circus.clustering] Searching random spikes to refine the clustering (2/3)... 2020-11-17 11:24:47,071 DEBUG [circus.clustering] Node 10 has collected 0 spikes and rejected 0 spikes 2020-11-17 11:24:47,071 DEBUG [circus.clustering] Node 7 has collected 0 spikes and rejected 0 spikes 2020-11-17 11:24:47,071 DEBUG [circus.clustering] Node 2 has ignored 10389 noisy spikes 2020-11-17 11:24:47,071 DEBUG [circus.clustering] Node 11 has ignored 12106 noisy spikes 2020-11-17 11:24:47,071 DEBUG [circus.clustering] Node 12 has ignored 12328 noisy spikes 22020-11-17 11:24:47,071 DEBUG [circus.clustering] Node 10 has ignored 11402 noisy spikes 2020-11-17 11:24:47,071 DEBUG [circus.clustering] Node 0 has ignored 22732 noisy spikes 2020-11-17 11:24:47,072 DEBUG [circus.clustering] Found 0 spikes over 199990 requested 2020-11-17 11:24:47,072 INFO [circus.clustering] No more spikes in the recording, stop searching 2020-11-17 11:24:47,076 DEBUG [circus.clustering] Refining density estimations... 2020-11-17 11:24:47,093 DEBUG [circus.clustering] Running density-based clustering... 2020-11-17 11:24:50,068 DEBUG [circus.clustering] Node 13: 1-0 negative templates on channel 13 from 701 spikes: [701] 2020-11-17 11:24:50,213 DEBUG [circus.clustering] Node 9: 1-0 negative templates on channel 9 from 1207 spikes: [1207] 2020-11-17 11:24:50,220 DEBUG [circus.clustering] Node 4: 1-0 negative templates on channel 4 from 974 spikes: [974] 2020-11-17 11:24:50,320 DEBUG [circus.clustering] Node 8: 1-0 negative templates on channel 8 from 2010 spikes: [2010] 2020-11-17 11:24:50,411 DEBUG [circus.clustering] Node 6: 1-0 negative templates on channel 6 from 2161 spikes: [2161] 2020-11-17 11:24:50,444 DEBUG [circus.clustering] Node 5: 2-1 negative templates on channel 5 from 1264 spikes: [1264] 2020-11-17 11:24:50,546 DEBUG [circus.clustering] Node 12: 2-1 negative templates on channel 12 from 697 spikes: [697] 2020-11-17 11:24:50,840 DEBUG [circus.clustering] Node 7: 1-0 negative templates on channel 7 from 872 spikes: [872] 2020-11-17 11:24:50,957 DEBUG [circus.clustering] Node 2: 2-1 negative templates on channel 16 from 993 spikes: [993] 2020-11-17 11:24:51,114 DEBUG [circus.clustering] Node 0: 2-1 negative templates on channel 14 from 1384 spikes: [1384] 2020-11-17 11:24:51,157 DEBUG [circus.clustering] Node 10: 2-0 negative templates on channel 24 from 1704 spikes: [1662, 42] 2020-11-17 11:24:51,360 DEBUG [circus.clustering] Node 8: 1-0 negative templates on channel 22 from 1347 spikes: [1347] 2020-11-17 11:24:51,368 DEBUG [circus.clustering] Node 9: 3-0 negative templates on channel 23 from 2356 spikes: [883, 27, 1446] 2020-11-17 11:24:51,500 DEBUG [circus.clustering] Node 6: 1-0 negative templates on channel 20 from 1777 spikes: [1777] 2020-11-17 11:24:51,592 DEBUG [circus.clustering] Node 3: 1-0 negative templates on channel 17 from 3555 spikes: [3555] 2020-11-17 11:24:51,848 DEBUG [circus.clustering] Node 5: 1-0 negative templates on channel 19 from 3532 spikes: [3532] 2020-11-17 11:24:51,870 DEBUG [circus.clustering] Node 4: 1-0 negative templates on channel 18 from 4366 spikes: [4366] 2020-11-17 11:24:51,955 DEBUG [circus.clustering] Node 1: 1-0 negative templates on channel 15 from 1685 spikes: [1685] 2020-11-17 11:24:52,098 DEBUG [circus.clustering] Node 7: 1-0 negative templates on channel 21 from 2591 spikes: [2591] 2020-11-17 11:24:52,102 INFO [circus.clustering] Number of clusters found : 28 2020-11-17 11:24:52,103 INFO [circus.clustering] Number of local merges : 6 (method nd-bhatta, param 2) 2020-11-17 11:24:52,103 INFO [circus.clustering] Not enough spikes gathered: -put safety_space=False? 2020-11-17 11:24:52,103 INFO [circus.clustering] -remove smart_search? 2020-11-17 11:24:52,103 DEBUG [circus.clustering] Estimating the templates with the median-raw procedure ... 2020-11-17 11:24:52,103 DEBUG [circus.clustering] Templates will be smoothed by Savitzky Golay Filtering ... 2020-11-17 11:24:52,811 DEBUG [circus.clustering] Merging similar templates... 2020-11-17 11:24:52,871 DEBUG [circus.shared.files] Overlaps computed, now gathering data by MPI 2020-11-17 11:24:53,192 DEBUG [circus.shared.algorithms] Node 0 is slicing templates 2020-11-17 11:24:53,243 DEBUG [circus.shared.algorithms] Node 0 is slicing clusters 2020-11-17 11:24:53,428 DEBUG [circus.clustering] Removing mixtures of templates... 2020-11-17 11:24:53,564 DEBUG [circus.shared.files] Overlaps computed, now gathering data by MPI 2020-11-17 11:24:53,867 INFO [circus.clustering] Number of global merges : 1 2020-11-17 11:24:53,867 INFO [circus.clustering] Number of mixtures removed : 0 2020-11-17 11:24:53,869 DEBUG [circus.clustering] Computing optimal amplitudes for the templates... 2020-11-17 11:24:55,897 DEBUG [circus.shared.files] Pre-computing the overlaps of templates... 2020-11-17 11:24:56,011 DEBUG [circus.shared.files] Overlaps computed, now gathering data by MPI 2020-11-17 11:24:56,092 DEBUG [circus.shared.files] Overlaps gathered, now computing overlaps/lags 2020-11-17 11:24:56,874 DEBUG [circus.shared.mpi] MPI detected: ('Intel MPI', (2019, 0, 8)) 2020-11-17 11:24:58,097 DEBUG [circus.shared.mpi] Setting data chunk size to 0.1 second 2020-11-17 11:24:58,104 DEBUG [circus.fitting] nb_chances set automatically to 1 2020-11-17 11:24:58,193 DEBUG [circus.fitting] Here comes the SpyKING CIRCUS using 14 CPUs and 27 templates... 2020-11-17 11:24:58,194 DEBUG [circus.shared.utils] Removing .data for directory D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data 2020-11-17 11:24:58,195 DEBUG [circus.files.datafile] There are 4263 chunks of size 3200 2020-11-17 11:24:58,195 DEBUG [circus.files.datafile] The last chunk has size 1664 2020-11-17 11:25:08,353 DEBUG [circus.shared.parser] Trying to read file D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data.dat as raw_binary 2020-11-17 11:25:08,353 DEBUG [circus.files.datafile] data_dtype is read from the params with a value of int16 2020-11-17 11:25:08,353 DEBUG [circus.files.datafile] sampling_rate is read from the params with a value of 32000.0 2020-11-17 11:25:08,353 DEBUG [circus.files.datafile] nb_channels is read from the params with a value of 32 2020-11-17 11:25:08,353 DEBUG [circus.files.datafile] dtype_offset is not set and has the default value of auto 2020-11-17 11:25:08,353 DEBUG [circus.files.datafile] data_offset is not set and has the default value of 0 2020-11-17 11:25:08,353 DEBUG [circus.files.datafile] gain is not set and has the default value of 1.0 2020-11-17 11:25:08,354 DEBUG [circus.files.datafile] data type offset for int16 is automatically set to 0 2020-11-17 11:25:08,356 DEBUG [circus.shared.files] Gathering spikes from 14 nodes... 2020-11-17 11:25:08,889 INFO [circus.shared.files] Number of spikes fitted : 258033 2020-11-17 11:25:08,896 DEBUG [circus.shared.utils] Removing .data for directory D:\Users\admin\Desktop\temp\spikeTest\Rat41cE08\data 2020-11-17 11:25:09,029 DEBUG [circus.shared.mpi] MPI detected: ('Intel MPI', (2019, 0, 8)) 2020-11-17 11:25:10,271 INFO [circus.converting] Exporting data for the phy GUI with 14 CPUs...