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Data collected from:
Wicker, Sabot, Hua-Van et al., 2007
Yuan and Wessler, 2011
Class 1 elements (Retrotransposons)
TSD_len TSD_pattern
Subclass 1 LTR 4-6 TG..CA
Superfamily Copia 4-6
Superfamily Gypsy 4-6
Superfamily Bel-Pao 4-6
Superfamily Retrovirus 4-6
Superfamily ERV 4-6
Class 2 elements (DNA Transposons)
Subclass 1 TIR
TSD_len TSD_pattern
Superfamily CACTA 2-3
Superfamily Mutator 9-11
Superfamily hAT (5-7)-8
Superfamily Tc1/Mariner 2 TA
example Group Stowaway
Superfamily PIF/Harbinger 2-3 T/A rich, TWA, AT, or AWT
example Group Tourist
Superfamily Merlin 8-(9)
Superfamily Transib 5
Superfamily P 7-8
Superfamily PiggyBac 4 TTAA
Superfamily Zator 2 TA
Superfamily MULE 9-10
Superfamily Kolobok 4 TTAA
Superfamily Novosib 8
Superfamily Sola1 4 WWWW
Superfamily Sola2 4
Superfamily Sola3 4 TTAA
Superfamily CMC 2-4
Superfamily Academ 3
Superfamily Ginger 4-(5)
Subclass 2 Maverick
Superfamily 2 Maverick 6
Parentheses in the TSDs indicate exceptional cases.
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