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addded one more Makefile

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commit d73fe17c6ce44b22fa8efa8b4ef198beba9eee09 1 parent 6ba8c73
@stamatak authored
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  1. +45 −0 Makefile.SSE3.mac
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45 Makefile.SSE3.mac
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+# Makefile August 2006 by Alexandros Stamatakis
+# Makefile cleanup October 2006, Courtesy of Peter Cordes <peter@cordes.ca>
+
+CC = clang
+
+CFLAGS = -D__SIM_SSE3 -msse3 -D_GNU_SOURCE -O2 -fomit-frame-pointer -funroll-loops #-Wall -pedantic -Wunused-parameter -Wredundant-decls -Wreturn-type -Wswitch-default -Wunused-value -Wimplicit -Wimplicit-function-declaration -Wimplicit-int -Wimport -Wunused -Wunused-function -Wunused-label -Wno-int-to-pointer-cast -Wbad-function-cast -Wmissing-declarations -Wmissing-prototypes -Wnested-externs -Wold-style-definition -Wstrict-prototypes -Wdeclaration-after-statement -Wpointer-sign -Wextra -Wredundant-decls -Wunused -Wunused-function -Wunused-parameter -Wunused-value -Wunused-variable -Wformat -Wformat-nonliteral -Wparentheses -Wsequence-point -Wuninitialized -Wundef -Wbad-function-cast
+
+LIBRARIES = -lm
+
+RM = rm -f
+
+objs = axml.o optimizeModel.o multiple.o searchAlgo.o topologies.o parsePartitions.o treeIO.o models.o bipartitionList.o rapidBootstrap.o evaluatePartialGenericSpecial.o evaluateGenericSpecial.o newviewGenericSpecial.o makenewzGenericSpecial.o classify.o fastDNAparsimony.o fastSearch.o leaveDropping.o rogueEPA.o ancestralStates.o mem_alloc.o
+
+all : raxmlHPC
+
+GLOBAL_DEPS = axml.h globalVariables.h mem_alloc.h
+
+raxmlHPC : $(objs)
+ $(CC) -o raxmlHPC-SSE3 $(objs) $(LIBRARIES)
+
+classify.o : classify.c $(GLOBAL_DEPS)
+evaluatePartialSpecialGeneric.o : evaluatePartialSpecialGeneric.c $(GLOBAL_DEPS)
+bipartitionList.o : bipartitionList.c $(GLOBAL_DEPS)
+optimizeModel.o : optimizeModel.c $(GLOBAL_DEPS)
+multiple.o : multiple.c $(GLOBAL_DEPS)
+axml.o : axml.c $(GLOBAL_DEPS)
+searchAlgo.o : searchAlgo.c $(GLOBAL_DEPS)
+topologies.o : topologies.c $(GLOBAL_DEPS)
+parsePartitions.o : parsePartitions.c $(GLOBAL_DEPS)
+treeIO.o : treeIO.c $(GLOBAL_DEPS)
+models.o : models.c $(GLOBAL_DEPS)
+rapidBootstrap.o : rapidBootstrap.c $(GLOBAL_DEPS)
+evaluatePartialGenericSpecial.o : evaluatePartialGenericSpecial.c $(GLOBAL_DEPS)
+evaluateGenericSpecial.o : evaluateGenericSpecial.c $(GLOBAL_DEPS)
+newviewGenericSpecial.o : newviewGenericSpecial.c $(GLOBAL_DEPS)
+makenewzGenericSpecial.o : makenewzGenericSpecial.c $(GLOBAL_DEPS)
+fastDNAparsimony.o : fastDNAparsimony.c $(GLOBAL_DEPS)
+fastSearch.o : fastSearch.c $(GLOBAL_DEPS)
+leaveDropping.o : leaveDropping.c $(GLOBAL_DEPS)
+rogueEPA.o : rogueEPA.c $(GLOBAL_DEPS)
+ancestralStates.o : ancestralStates.c $(GLOBAL_DEPS)
+mem_alloc.o : mem_alloc.c $(GLOBAL_DEPS)
+
+clean :
+ $(RM) *.o raxmlHPC-SSE3
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