Staphopia Web Application Powered By Django
Python PLpgSQL HTML Other
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annotation extract_genome now output puts genes based on asummary Apr 3, 2018
api disabled email changer related links, defaulted account settings to A… Apr 22, 2018
assembly more transitions Jan 31, 2018
autofill update migrations Dec 13, 2017
cgmlst API additions and fixes Mar 13, 2018
config updated database schema Apr 9, 2018
ena API additions and fixes Mar 13, 2018
gene fixed bug in create document and automated fasta output of contigs an… Apr 10, 2018
kmer update migrations Dec 13, 2017
logs cleaned up gitignore Apr 5, 2016
metadata update migrations Dec 13, 2017
mlst cleanup Mar 20, 2018
plasmid filter plasmids less than 200bp Dec 18, 2017
publication added publication related API endpoints Mar 29, 2018
resistance added scripts for NRD dataset creation Apr 9, 2018
sample fixed divide by 0 error on mlst loci without coverage Apr 26, 2018
sccmec no longer include mid line in blast results, fixed contig id for sccm… Apr 2, 2018
search update migrations Dec 13, 2017
sequence force single end reads to be bronze Mar 20, 2018
staphopia added a landing page for errors (bug found, admin notified) Apr 26, 2018
tag added "is_public" column to tags Mar 13, 2018
variant disabled email changer related links, defaulted account settings to A… Apr 22, 2018
version updated methods to insert mlst results Dec 15, 2017
virulence add ariba summary to database Mar 21, 2018
.gitignore removing unused functions May 15, 2017
README.md Added more info to landing page Aug 7, 2017
manage.py fixed new account registration Apr 13, 2018
requirements.txt Update requirements.txt Apr 16, 2018

README.md

Staphopia-Web

This is the repository for the Django powered Staphopia.