minor improvements

container/course_packages_conda.csv

@@ -1,4 +1,5 @@
 Package,Homepage,Language,Version,Channel,Evironment,Link,Notes
+r-pecotmr,https://github.com/cumc/pecotmr,R,,dnachun,,https://anaconda.org/dnachun/r-pecotmr,
 plink,https://www.cog-genomics.org/plink/2.0/,C/C++,,bioconda,plink,https://anaconda.org/bioconda/plink,
 plink2,https://www.cog-genomics.org/plink/2.0/,C/C++,,bioconda,plink,https://anaconda.org/bioconda/plink2,
 KING,http://people.virginia.edu/~wc9c/KING/,C/C++,,bioconda,plink,https://anaconda.org/bioconda/king,
@@ -11,16 +12,15 @@ bigsnpr,https://privefl.github.io/bigsnpr/,R,,conda-forge,,https://anaconda.org/
 bigsparser,https://github.com/privefl/bigsparser,R,,conda-forge,,https://anaconda.org/conda-forge/r-bigsparser,
 ggplot2,"http://ggplot2.tidyverse.org, https://github.com/tidyverse/ggplot2",R,,conda-forge,,https://anaconda.org/conda-forge/r-ggplot2,
 gplots,https://CRAN.R-project.org/package=gplots,R,,conda-forge,,https://anaconda.org/conda-forge/r-gplots,
-R.utils,https://github.com/HenrikBengtsson/R.utils,R,,conda-forge,,https://anaconda.org/conda-forge/r-r.utils,
 mediation,https://CRAN.R-project.org/package=RMediation,R,,conda-forge,,https://anaconda.org/conda-forge/r-rmediation,
 BiocManager,https://CRAN.R-project.org/package=BiocManager,R,,cona-forge,,https://anaconda.org/conda-forge/r-biocmanager,
 multtest,https://bioconductor.org/packages/3.18/bioc/html/multtest.html,R,,bioconda,,https://anaconda.org/bioconda/bioconductor-multtest,
 plinkseq,https://atgu.mgh.harvard.edu/plinkseq/,C/C++,,hcc,pseq,https://anaconda.org/hcc/plinkseq,
 regenie,https://rgcgithub.github.io/regenie/,C/C++,,bioconda,regenie,https://anaconda.org/bioconda/regenie,
 ggrepel,http://github.com/slowkow/ggrepel,R,,conda-forge,,https://anaconda.org/conda-forge/r-ggrepel,
 qqman,https://CRAN.R-project.org/package=qqman,R,,conda-forge,,https://anaconda.org/conda-forge/r-qqman,
-bgen,https://github.com/limix/bgen,,,conda-dorge,regenie,https://anaconda.org/conda-forge/bgen,
-bgen-reader,http://github.com/limix/bgen-reader-py,,,conda-dorge,regenie,https://anaconda.org/conda-forge/bgen-reader,
+bgen,https://github.com/limix/bgen,C/C++,,conda-dorge,regenie,https://anaconda.org/conda-forge/bgen,
+bgen-reader,http://github.com/limix/bgen-reader-py,C/C++,,conda-dorge,regenie,https://anaconda.org/conda-forge/bgen-reader,
 reshape2,https://github.com/hadley/reshape,R,,conda-forge,,https://anaconda.org/conda-forge/r-reshape2,
 grid,https://github.com/pmur002/gridgraphics,R,,conda-forge,,https://anaconda.org/conda-forge/r-gridgraphics,
 gridExtra,https://github.com/baptiste/gridextra,R,,conda-forge,,https://anaconda.org/conda-forge/r-gridextra,
@@ -35,7 +35,6 @@ scipy,http://www.scipy.org/,python,,conda-forge,,https://anaconda.org/conda-forg
 abind,https://cran.r-project.org/package=abind,R,,conda-forge,,https://anaconda.org/conda-forge/r-abind,
 tibble,"https://tibble.tidyverse.org/, https://github.com/tidyverse/tibble",R,,conda-forge,,https://anaconda.org/conda-forge/r-tibble,
 purrr,https://purrr.tidyverse.org,R,,conda-forge,,https://anaconda.org/conda-forge/r-purrr,
-pecotmr,https://github.com/cumc/pecotmr,R,,dnachun,,https://anaconda.org/dnachun/r-pecotmr,
 htslib,http://www.htslib.org/,C/C++,,bioconda,,https://anaconda.org/bioconda/htslib,
 r-bedtoolsr,https://github.com/PhanstielLab/bedtoolsr,R,2.30.0.2,bioconda,,https://anaconda.org/bioconda/r-bedtoolsr,
 bcftools,https://samtools.github.io/bcftools/,C/C++,1.17,bioconda,,https://anaconda.org/bioconda/bcftools,