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Good question for d3. My understanding is that d3 is mainly focused on manipulating the DOM while p5 essentially lives in a canvas element. D3 seems to be a higher level way to present your data and shines at creating charts and tables and this kind of visualizations while p5 is more about "lower level" drawing with primitives like circle and rect, some vector math, some pixel manipulation etc.
But that is only my basic understanding from quickly glancing at d3 docs. I plan to explore Three.js and d3.js in future projects to get a better understanding of what they can and can't do.
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