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ubuntu failues: tsa_plot and grouputils #1521

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josef-pkt opened this issue Mar 27, 2014 · 5 comments

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commented Mar 27, 2014

looks like with pandas 0.14.0

https://launchpadlibrarian.net/170611901/buildlog_ubuntu-saucy-i386.statsmodels_0.6.0~ppa18~revno-1586~ubuntu13.10.1_UPLOADING.txt.gz

======================================================================
ERROR: statsmodels.graphics.tests.test_tsaplots.test_plot_quarter
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File "/usr/lib/python2.7/dist-packages/numpy/testing/decorators.py", line 146, in skipper_func
    return f(*args, **kwargs)
  File "/build/buildd/statsmodels-0.6.0~ppa18~revno/debian/python-statsmodels/usr/lib/python2.7/dist-packages/statsmodels/graphics/tests/test_tsaplots.py", line 84, in test_plot_quarter
    quarter_plot(dta.unemp)
  File "/build/buildd/statsmodels-0.6.0~ppa18~revno/debian/python-statsmodels/usr/lib/python2.7/dist-packages/statsmodels/graphics/tsaplots.py", line 280, in quarter_plot
    _check_period_index(x, freq="Q")
  File "/build/buildd/statsmodels-0.6.0~ppa18~revno/debian/python-statsmodels/usr/lib/python2.7/dist-packages/statsmodels/tools/data.py", line 22, in _check_period_index
    raise ValueError("The index must be a DatetimeIndex or PeriodIndex")
ValueError: The index must be a DatetimeIndex or PeriodIndex


======================================================================
FAIL: statsmodels.tools.tests.test_grouputils.TestIndexGrouping.test_transform_slices
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File "/build/buildd/statsmodels-0.6.0~ppa18~revno/debian/python-statsmodels/usr/lib/python2.7/dist-packages/statsmodels/tools/tests/test_grouputils.py", line 112, in test_transform_slices
    expected.values)
  File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 719, in assert_array_equal
    verbose=verbose, header='Arrays are not equal')
  File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 645, in assert_array_compare
    raise AssertionError(msg)
AssertionError: 
Arrays are not equal

(mismatch 22.7272727273%)
 x: array([[  6.84840000e+00,   5.75448500e+01,   6.80224500e+01,
          1.94450000e+03],
       [  6.18025000e+01,   2.31470000e+02,   4.86765000e+02,...
 y: array([[  6.84840000e+00,   5.75448500e+01,   6.80224500e+01,
          1.94450000e+03],
       [  6.18025000e+01,   2.31470000e+02,   4.86765000e+02,...

======================================================================
FAIL: statsmodels.tools.tests.test_grouputils.TestMultiIndexGrouping.test_transform_slices
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File "/build/buildd/statsmodels-0.6.0~ppa18~revno/debian/python-statsmodels/usr/lib/python2.7/dist-packages/statsmodels/tools/tests/test_grouputils.py", line 112, in test_transform_slices
    expected.values)
  File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 719, in assert_array_equal
    verbose=verbose, header='Arrays are not equal')
  File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 645, in assert_array_compare
    raise AssertionError(msg)
AssertionError: 
Arrays are not equal

(mismatch 30.303030303%)
 x: array([[  6.84840000e+00,   5.75448500e+01,   6.80224500e+01],
       [  6.18025000e+01,   2.31470000e+02,   4.86765000e+02],
       [  8.61235000e+01,   6.93210000e+02,   1.21245000e+02],...
 y: array([[  6.84840000e+00,   5.75448500e+01,   6.80224500e+01],
       [  6.18025000e+01,   2.31470000e+02,   4.86765000e+02],
       [  8.61235000e+01,   6.93210000e+02,   1.21245000e+02],...

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commented Mar 27, 2014

@jseabold do you see failures with pandas master, which it looks like pythonxy ubuntu is using?

Get:8 http://ppa.launchpad.net/pythonxy/pythonxy-devel/ubuntu/ saucy/main python-pandas all 0.14.0~ppa16~revno-6118~ubuntu13.10.1

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commented Mar 27, 2014

amd64 has the tsa_plot failure but not the other two
but the ARMA small data SVD not coverged is also on amd64

Get:131 http://ftpmaster.internal/ubuntu/ saucy/main python-numpy amd64 1:1.7.1-1ubuntu1

https://launchpadlibrarian.net/170611174/buildlog_ubuntu-saucy-amd64.statsmodels_0.6.0~ppa18~revno-1586~ubuntu13.10.1_UPLOADING.txt.gz

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commented Mar 27, 2014

Yeah, the latter look like 32-bit issues. The former, I don't know about. I do see it locally. I'll have to look. I think I actually relaxed this check in my exponential smoothing branch.

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commented Mar 30, 2014

adding this here test failures with pandas 0.11 found while version testing in
#1523 (comment)

needs decision: fix or require pandas >= 0.12

======================================================================
ERROR: statsmodels.tools.tests.test_grouputils.TestIndexGrouping.test_count_categories
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/statsmodels-0.6.0-py2.6-linux-x86_64.egg/statsmodels/tools/tests/test_grouputils.py", line 16, in test_count_categories
    self.grouping.count_categories(level=0)
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/statsmodels-0.6.0-py2.6-linux-x86_64.egg/statsmodels/tools/grouputils.py", line 410, in count_categories
    self.counts = np.bincount(self.labels[level])
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/statsmodels-0.6.0-py2.6-linux-x86_64.egg/statsmodels/tools/grouputils.py", line 373, in labels
    return pd.Categorical(self.index).labels[None]
TypeError: __init__() takes at least 3 arguments (2 given)
======================================================================
ERROR: statsmodels.tools.tests.test_grouputils.TestIndexGrouping.test_dummies_groups
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/statsmodels-0.6.0-py2.6-linux-x86_64.egg/statsmodels/tools/tests/test_grouputils.py", line 127, in test_dummies_groups
    self.grouping.dummies_groups()
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/statsmodels-0.6.0-py2.6-linux-x86_64.egg/statsmodels/tools/grouputils.py", line 496, in dummies_groups
    self.dummy_sparse(level=level)
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/statsmodels-0.6.0-py2.6-linux-x86_64.egg/statsmodels/tools/grouputils.py", line 546, in dummy_sparse
    groups = self.labels[level]
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/statsmodels-0.6.0-py2.6-linux-x86_64.egg/statsmodels/tools/grouputils.py", line 373, in labels
    return pd.Categorical(self.index).labels[None]
TypeError: __init__() takes at least 3 arguments (2 given)
======================================================================
ERROR: statsmodels.tools.tests.test_grouputils.TestIndexGrouping.test_dummy_sparse
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/statsmodels-0.6.0-py2.6-linux-x86_64.egg/statsmodels/tools/tests/test_grouputils.py", line 134, in test_dummy_sparse
    self.grouping.dummy_sparse()
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/statsmodels-0.6.0-py2.6-linux-x86_64.egg/statsmodels/tools/grouputils.py", line 546, in dummy_sparse
    groups = self.labels[level]
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/statsmodels-0.6.0-py2.6-linux-x86_64.egg/statsmodels/tools/grouputils.py", line 373, in labels
    return pd.Categorical(self.index).labels[None]
TypeError: __init__() takes at least 3 arguments (2 given)
======================================================================
FAIL: statsmodels.tools.tests.test_grouputils.test_init_api
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/statsmodels-0.6.0-py2.6-linux-x86_64.egg/statsmodels/tools/tests/test_grouputils.py", line 238, in test_init_api
    np.testing.assert_array_equal(grouping.group_names, ['firms'])
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/numpy/testing/utils.py", line 719, in assert_array_equal
    verbose=verbose, header='Arrays are not equal')
  File "/home/travis/miniconda/envs/statsmodels-test/lib/python2.6/site-packages/numpy/testing/utils.py", line 645, in assert_array_compare
    raise AssertionError(msg)
AssertionError: 
Arrays are not equal
(mismatch 100.0%)
 x: array(['firm'], 
      dtype='|S4')
 y: array(['firms'], 
      dtype='|S5')

@jseabold jseabold added this to the 0.5.1 milestone Mar 30, 2014

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commented Jun 18, 2014

closing:
we haven't seen this again, parts are fixed and we increasing pandas version requirement

@josef-pkt josef-pkt closed this Jun 18, 2014

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