Shell bootloader for bioinformatics.
Bash shell running on either Linux or macOS is currently supported.
First, clone the repository:
git clone https://github.com/steinbaugh/koopa.git ~/koopa
Second, add these lines to
# koopa shell # https://github.com/steinbaugh/koopa source ~/koopa/bin/koopa activate
Koopa should now activate at login. To obtain information on the current working enviroment, simply run
High-performance computing (HPC) environment
Since workload managers (e.g. Slurm, LSF) can spawn non-interactive login shells for new jobs, we recommend additionally symlinking
~/.bash_profile. For non-interactive login shells, koopa doesn't attempt to print any messages, so the shell remains clean.