dsc-finemap
DSC for comparing genetic fine-mapping methods.
Benchmarks
SuSiE manuscript benchmark
Please use command
dsc susie_paper.dsc -h
to view available runs, and
dsc susie_paper.dsc
dsc susie_paper.dsc --target all_ten
to run the benchmark.
SuSiE RSS benchmark
Please use command
dsc susie_rss.dsc -h
to view available runs, and
dsc susie_rss.dsc
to run the benchmark.
Organize benchmark results
See folder analysis
. It contains some pipelines, mostly written in SoS workflow and uses dscrutils
package, to make various benchmark plots.