No description, website, or topics provided.
Switch branches/tags
Nothing to show
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Failed to load latest commit information.
backend
Dockerfile
README.md
dict3d-model.pkl
docker-compose.yml
models.py
requirements.txt
run.py
run_utils.py

README.md

SterSEG

Information

Copyright (c) 2016 by Stermedia Sp. z o.o.

Contributors:
J.Czakon, W.Dyrka, P.Giedziun

Please cite:
[1] J.Czakon, F.Drapejkowski, G.Zurek, P.Giedziun, J.Zebrowski, W.Dyrka. Machine learning methods for accurate
    delineation of tumors in PET images. MICCAI 2016 - PETSEG challenge, Athens, 21.10.2016

Part of this work has been conducted under the Support Programme of the Partnership between Higher Education
    and Science and Business Activity Sector financed by City of Wroclaw.

RUN

docker-compose build

# kmeans, k=2
docker-compose run --rm pet python run.py -m KM -kn 2 -kf 1 -i your_pet.nii -ot nii -o your_output.nii

# more ..
docker-compose run --rm pet python run.py --help