EpiContactTrace

EpiContactTrace is a package for facilitating livestock contact tracing and risk based surveillance. EpiContactTrace uses the network parameters: in-degree, out-degree, ingoing contact-chain and outgoing contact-chain, which are relevant for forward- and backward contact-tracing respectively. The package can generate reports to visualize the contact structure on the farm level.

You can track (and contribute to) development of EpiContactTrace at https://github.com/stewid/EpiContactTrace.

Installation

To install the latest release on CRAN

install.packages("EpiContactTrace")

To install the development version of EpiContactTrace from GitHub, it's easiest to use the remotes package:

# install.packages("remotes")
library(remotes)
install_github("stewid/EpiContactTrace")

License

The EpiContactTrace package is licensed under the European Union Public Licence (EUPL) http://ec.europa.eu/idabc/eupl