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@StoreyLab

Storey Lab

Storey Lab at Princeton University

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  1. qvalue qvalue Public

    R package to estimate q-values and false discovery rate quantities.

    R 109 36

  2. edge edge Public

    R package for identifying differentially expressed genes from genome-wide gene expression profiling studies.

    R 21 9

  3. gcatest gcatest Public

    genotype conditional association test

    R 5 3

  4. lfa lfa Public

    logistic factor analysis

    R 15 8

  5. popkin popkin Public

    R package to estimate kinship and FST from SNP data

    R 19

  6. terastructure terastructure Public

    TeraStructure is a new algorithm to fit Bayesian models of genetic variation in human populations on tera-sample-sized data sets (10^12 observed genotypes, i.e., 1M individuals at 1M SNPs). This pa…

    C++ 47 9

Repositories

Showing 10 of 27 repositories
  • storeylab.github.io Public
    StoreyLab/storeylab.github.io’s past year of commit activity
    HTML 0 0 0 0 Updated Aug 1, 2024
  • gcatest Public

    genotype conditional association test

    StoreyLab/gcatest’s past year of commit activity
    R 5 GPL-3.0 3 0 0 Updated Mar 6, 2024
  • lfa Public

    logistic factor analysis

    StoreyLab/lfa’s past year of commit activity
    R 15 GPL-3.0 8 1 0 Updated Mar 6, 2024
  • qvalue Public

    R package to estimate q-values and false discovery rate quantities.

    StoreyLab/qvalue’s past year of commit activity
    R 109 36 5 2 Updated Sep 1, 2023
  • bnpsd Public

    R package to model and simulate admixed populations

    StoreyLab/bnpsd’s past year of commit activity
    R 8 GPL-3.0 0 0 0 Updated Jul 21, 2023
  • popkin Public

    R package to estimate kinship and FST from SNP data

    StoreyLab/popkin’s past year of commit activity
    R 19 0 2 0 Updated Apr 28, 2023
  • superSeq-manuscript Public
    StoreyLab/superSeq-manuscript’s past year of commit activity
    R 2 MIT 0 0 0 Updated Jul 29, 2021
  • fFDR Public

    Functional FDR package

    StoreyLab/fFDR’s past year of commit activity
    R 5 1 6 (1 issue needs help) 0 Updated Mar 8, 2021
  • terastructure Public

    TeraStructure is a new algorithm to fit Bayesian models of genetic variation in human populations on tera-sample-sized data sets (10^12 observed genotypes, i.e., 1M individuals at 1M SNPs). This package provides a scalable, multi-threaded C++ implementation that can be run on a single computer.

    StoreyLab/terastructure’s past year of commit activity
    C++ 47 GPL-3.0 9 6 2 Updated Jan 1, 2020
  • human-differentiation-manuscript Public

    Details on the data analysis for "New kinship and F_ST estimates reveal higher levels of differentiation in the global human population" by Ochoa and Storey

    StoreyLab/human-differentiation-manuscript’s past year of commit activity
    q 3 MIT 0 0 0 Updated Oct 17, 2019
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