Grow your team on GitHub
GitHub is home to over 28 million developers working together. Join them to grow your own development teams, manage permissions, and collaborate on projects.Sign up
Student course material for the Applied Bioinformatics course at Scripps Research
A configurable codebase for launching organism specific WikiGenomes spinoff applications (e.g. ChlamBase.org) This is a web application framework for creating a model organism database leveraging the taxonomic, genetic and functional data that has been loaded to Wikidata.org by the Gene Wiki Project.
GeneWiki Scheduled Bots
A Wikidata Python module integrating the MediaWiki API and the Wikidata SPARQL endpoint
Scripts for kidney transplantation association study
This the material for our TopCoder Challenge
Mercator app for RNA-seq map
Mercator app for Allen Brain Atlas data
Mark2Cure allows anyone that can read English, regardless of background, to help in the process of biomedical discovery.
Data and source files for work relating to expression map project.
Biothings.api repo for Wikidata
Translate neo4j query output to YAML file suitable for importing to NCATS reasoner
Translator Path Prioritization (TraPP) tool
Wikidata Semantic Query API
BioGPS.org dataset & dataset loading code repository
A configurable codebase for launching organism specific WikiGenomes spinoff applications (e.g. LactoBase.org)
Rare disease network.
Genome data portal for the GeneWiki Project in Wikidata
MyGene.info: A BioThings API for gene annotations
MyVariant.info: A BioThings API for human variant annotations
BioThings API framework - Making high-performance API for biological annotation data