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Prepare June 2019 Lesson Release #418

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merged 14 commits into from May 24, 2019

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commented Apr 18, 2019

This collects changes in response to #415.

  • verify dc48516 on a fresh machine (already done on in-use Windows & macOS)
  • implement #427
  • re-render all figures at the very end

@katrinleinweber katrinleinweber requested a review from diyadas Apr 18, 2019

katrinleinweber added some commits Apr 23, 2019

Correct minor mistake in mean calculation across...
... all columns/variables/days of a row/observation/patient. Presumably, R updates in the last few years downgraded this case from error to warning, or whoever added this code had applied the advice like https://www.r-bloggers.com/a-warning-about-warning/#step2-strategically-maneuver-3rd-party-warnings
Repair figure link & filename
Ensure that plot gets rendered on the Extras > Figures page

@katrinleinweber katrinleinweber referenced this pull request Apr 25, 2019

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June 2019 Lesson Release checklist #415

12 of 12 tasks complete
@diyadas

diyadas approved these changes May 5, 2019

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Oops - not sure how I missed this, but it looks great to me.

@katrinleinweber katrinleinweber force-pushed the 415-june-2019-lesson-release branch from 74483c8 to 072126e May 13, 2019

katrinleinweber added some commits May 13, 2019

Add solution for last plotting challenge (see #427)
The code for including the plotted PNG would be:

> > <img src="../fig/rmd-01-starting-with-data-plot-sd-inflammation-1.png" alt="Standard deviation of the inflammation for each day across all patients." />

```{r plot-sd-inflammation, echo=FALSE, include=FALSE}
sd_day_inflammation <- apply(dat, 2, sd)
plot(sd_day_inflammation)
```

@katrinleinweber katrinleinweber force-pushed the 415-june-2019-lesson-release branch from 1d5e4ee to a1bbbe4 May 13, 2019

@katrinleinweber katrinleinweber merged commit 8fe49a9 into master May 24, 2019

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katrinleinweber added a commit that referenced this pull request May 24, 2019

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