.Rbuildignore

@@ -0,0 +1,14 @@
+^.*\.Rproj$
+^\.Rproj\.user$
+^README\.Rmd$
+^README\.HTML$
+^README-.*\.png$
+^README_.*\.png$
+QEE2.out
+^\.travis\.yml$
+cran-comments.md
+changes.txt
+\.fsrc$
+^.*\.o$
+\.so$
+\.dll$

.gitignore

@@ -0,0 +1,10 @@
+.Rproj.user
+.Rhistory
+.RData
+.Ruserdata
+src/*.o
+src/*.so
+src/*.dll
+event.Rproj
+README.Rmd
+README_files/*

.travis.yml

@@ -0,0 +1,32 @@
+# Sample .travis.yml for R projects
+
+language: r
+warnings_are_errors: true
+sudo: required
+
+
+matrix:
+  include:
+    - os: linux
+      compiler: gcc
+      r: release
+      r_check_args: --as-cran --use-valgrind
+      addons:
+        apt:
+          sources: ['ubuntu-toolchain-r-test']
+          packages:
+          - valgrind
+          - ['g++-6']
+      env:
+        - COMPILER=g++-6
+        - CC=gcc=6
+        - CXX=g++-6
+
+env:
+ global:
+   - CRAN: http://cran.rstudio.com
+
+notifications:
+  email:
+    on_success: change
+    on_failure: change

DESCRIPTION

@@ -1,9 +1,16 @@
-Package: event
-Version: 1.0
-Title: Event History Procedures and Models
-Author: Jim Lindsey <jlindsey@gen.unimaas.nl>
-Maintainer:  Jim Lindsey <jlindsey@gen.unimaas.nl>
-Depends: R (>= 1.4), rmutil
-Description: Functions for setting up and analyzing event history data.
-License: GPL version 2 or later
-URL: popgen.unimaas.nl/~jlindsey/rcode.html
+Package: event
+Version: 1.1.0
+Title: Event History Procedures and Models
+Authors@R: c(
+    person("Bruce", "Swihart", email="bruce.swihart@gmail.com", role=c("cre", "aut")),
+    person("Jim"  , "Lindsey", email="jlindsey@gen.unimaas.nl", role="aut", comment="Jim created this package, Bruce is maintaining the CRAN version"))
+Depends:
+    R (>= 1.4),
+    rmutil
+Description: Functions for setting up and analyzing event history data.
+License: GPL-2
+URL: http://www.commanster.eu/rcode.html
+BugReports: https:/github.com/swihart/event/issues
+Encoding: UTF-8
+LazyData: true
+LazyLoad: true

NAMESPACE

@@ -1,13 +1,43 @@
-useDynLib("event")
-
-import(rmutil)
-
-export(autointensity,
-coxre,print.llrf,
-cprocess,
-ehr,pp,ident,tpast,ttime,bp,tccov,tvcov,vdm,deviance.intensity,print.intensity,
-hboxcox,hburr,hcauchy,hexp,hgextval,hgamma,hggamma,hhjorth,hinvgauss,hlaplace,hlnorm,hlogis,hglogis,hnorm,hpareto,hstudent,hweibull,hgweibull,hskewlaplace,
-kalsurv,deviance.kalsurv,fitted.kalsurv,residuals.kalsurv,print.kalsurv,
-km,print.km,plot.km,plot.surv,plot.intensity,plot.intensity.default,plot.intensity.km,plot.dist,plot.dist.km,
-pbirth,deviance.pbirth,print.pbirth,
-survkit,residuals.survivalkit,print.survivalkit,baseline,baseline.survivalkit,survival,survival.survivalkit)
+useDynLib("event")
+
+import(rmutil)
+
+export(autointensity,
+coxre,print.llrf,
+cprocess,
+ehr,pp,ident,tpast,ttime,bp,tccov,tvcov,vdm,deviance.intensity,print.intensity,
+hboxcox,hburr,hcauchy,hexp,hgextval,hgamma,hggamma,hhjorth,hinvgauss,hlaplace,hlnorm,hlogis,hglogis,hnorm,hpareto,hstudent,hweibull,hgweibull,hskewlaplace,
+kalsurv,deviance.kalsurv,fitted.kalsurv,residuals.kalsurv,print.kalsurv,
+km,print.km,plot.km,plot.surv,plot.intensity,plot.intensity.default,plot.intensity.km,plot.dist,plot.dist.km,
+pbirth,deviance.pbirth,print.pbirth,
+survkit,residuals.survivalkit,print.survivalkit,baseline,baseline.survivalkit,survival,survival.survivalkit)
+
+  importFrom("grDevices", "gray")
+  importFrom("graphics", "hist", "lines", "par", "plot", "text")
+  importFrom("stats", "dcauchy", "dgamma", "dlnorm", "dlogis", "dnorm",
+             "glm", "model.frame", "na.fail", "nlm", "pbeta", "pcauchy",
+             "pgamma", "plnorm", "plogis", "pnorm", "poisson",
+             "pweibull", "qnorm", "terms")
+
+
+S3method(   baseline, survivalkit )
+S3method(   deviance, intensity )
+S3method(   deviance, kalsurv)
+S3method(   deviance, pbirth )
+S3method(   fitted, kalsurv )
+S3method(   plot, dist )
+S3method(   plot, dist.km) 
+S3method(  plot, intensity) 
+S3method(  plot, intensity.default )
+S3method(  plot, intensity.km )
+S3method(  plot, km )
+S3method(  plot, surv) 
+S3method(  print, intensity)
+S3method(  print, kalsurv )
+S3method(  print, km )
+S3method(  print, llrf) 
+S3method(  print, pbirth) 
+S3method(  print, survivalkit)
+S3method(  residuals, kalsurv )
+S3method(  residuals, survivalkit )
+S3method(  survival, survivalkit)