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R interface for interaction with NaviCell maps
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RNaviCell

NaviCell is a web tool for exploring large biological molecular interactions maps.

NaviCell Web Service for Network-based Data Visualization allows mapping high-throughput data (mRNA, microRNA and protein expressions, gene copy number and mutation profiles, simple gene lists and clinical data) onto NaviCell network maps. We have developped a REST-like API to automate the process and allow people to create and play with graphical representations, and we are developping bindings to different popular languages (currently Python, R and Java).

RNaviCell is the R implementation to access the NaviCell web service.

A step-by-step tutorial with a concrete biological example is available on the wiki.

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