Peak calling tool for CLIP-seq data
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README.md

PEAKachu

Peak calling tool for CLIP-seq data

Installation

PEAKachu is available via bioconda and can be installed using

conda create -n peakachu peakachu python=3

Alternativaly, PEAKachu can be installed from source

$ make readme_rst
$ make package
$ pip3 install --user dist/PEAKachu-0.1.0.tar.gz

License

ICSL (Internet Systems Consortium license ~ simplified BSD license) - see LICENSE

Development

  • The git braching model is very close to the one proposed here. There two main branches:

    • master
    • dev(elopment)

    And there are further supporting branches:

    • feature branches - branched off and back to the dev branch
    • release branches - branched off from dev and merged back into dev and master
    • hotfix branches - branched off from master and merged back into dev and master