diff --git a/.circleci/config.yml b/.circleci/config.yml index 2bfbf168..397c3696 100644 --- a/.circleci/config.yml +++ b/.circleci/config.yml @@ -30,7 +30,8 @@ jobs: command: | if [[ ! -e "/tmp/cache/git-annex-standalone.tar.gz" ]]; then wget -O- http://neuro.debian.net/lists/focal.us-ca.full | sudo tee /etc/apt/sources.list.d/neurodebian.sources.list - sudo apt-key adv --recv-keys --keyserver hkp://pool.sks-keyservers.net:80 0xA5D32F012649A5A9 + sudo apt-key add /tmp/src/templateflow/.neurodebian/neurodebian.gpg + sudo apt-key adv --recv-keys --keyserver hkps://keys.openpgp.org 0xA5D32F012649A5A9 || true sudo apt update && sudo apt-get install -y --no-install-recommends git-annex-standalone mkdir -p /tmp/cache tar czvf /tmp/cache/git-annex-standalone.tar.gz /usr/bin/git-annex /usr/bin/git-annex-shell /usr/lib/git-annex.linux diff --git a/.neurodebian/neurodebian.gpg b/.neurodebian/neurodebian.gpg new file mode 100644 index 00000000..c546d45d --- /dev/null +++ b/.neurodebian/neurodebian.gpg @@ -0,0 +1,71 @@ +-----BEGIN PGP PUBLIC KEY BLOCK----- +Version: GnuPG v1 + +mQGiBEQ7TOgRBADvaRsIZ3VZ6Qy7PlDpdMm97m0OfvouOj/HhjOM4M3ECbGn4cYh +vN1gK586s3sUsUcNQ8LuWvNsYhxYsVTZymCReJMEDxod0U6/z/oIbpWv5svF3kpl +ogA66Ju/6cZx62RiCSOkskI6A3Waj6xHyEo8AGOPfzbMoOOQ1TS1u9s2FwCgxziL +wADvKYlDZnWM03QtqIJVD8UEAOks9Q2OqFoqKarj6xTRdOYIBVEp2jhozZUZmLmz +pKL9E4NKGfixqxdVimFcRUGM5h7R2w7ORqXjCzpiPmgdv3jJLWDnmHLmMYRYQc8p +5nqo8mxuO3zJugxBemWoacBDd1MJaH7nK20Hsk9L/jvU/qLxPJotMStTnwO+EpsK +HlihA/9ZpvzR1QWNUd9nSuNR3byJhaXvxqQltsM7tLqAT4qAOJIcMjxr+qESdEbx +NHM5M1Y21ZynrsQw+Fb1WHXNbP79vzOxHoZR0+OXe8uUpkri2d9iOocre3NUdpOO +JHtl6cGGTFILt8tSuOVxMT/+nlo038JQB2jARe4B85O0tkPIPbQybmV1cm8uZGVi +aWFuLm5ldCBhcmNoaXZlIDxtaWNoYWVsLmhhbmtlQGdtYWlsLmNvbT6IRgQQEQgA +BgUCTVHJKwAKCRCNEUVjdcAkyOvzAJ0abJz+f2a6VZG1c9T8NHMTYh1atwCgt0EE +3ZZd/2in64jSzu0miqhXbOKISgQQEQIACgUCSotRlwMFAXgACgkQ93+NsjFEvg8n +JgCfWcdJbILBtpLZCocvOzlLPqJ0Fn0AoI4EpJRxoUnrtzBGUC1MqecU7WsDiGAE +ExECACAFAkqLUWcCGwMGCwkIBwMCBBUCCAMEFgIDAQIeAQIXgAAKCRCl0y8BJkml +qVklAJ4h2V6MdQkSAThF5c2Gkq6eSoIQYQCeM0DWyB9Bl+tTPSTYXwwZi2uoif20 +QmFwc3kuZ3NlLnVuaS1tYWdkZWJ1cmcuZGUgRGViaWFuIEFyY2hpdmUgPG1pY2hh +ZWwuaGFua2VAZ21haWwuY29tPohGBBARAgAGBQJEO03FAAoJEPd/jbIxRL4PU18A +n3tn7i4qdlMi8kHbYWFoabsKc9beAJ9sl/leZNCYNMGhz+u6BQgyeLKw94heBBMR +AgAeBQJEO0zoAhsDBgsJCAcDAgMVAgMDFgIBAh4BAheAAAoJEKXTLwEmSaWpVdoA +n27DvtZizNEbhz3wRUPQMiQjtqdvAJ9rS9YdPe5h5o5gHx3mw3BSkOttdYheBBMR +AgAeBQJEO0zoAhsDBgsJCAcDAgMVAgMDFgIBAh4BAheAAAoJEKXTLwEmSaWpVdoA +oLhwWL+E+2I9lrUf4Lf26quOK9vLAKC9ZpIF2tUirFFkBWnQvu13/TA0SokCHAQQ +AQIABgUCTSNBgQAKCRDAc9Iof/uem4NpEACQ8jxmaCaS/qk/Y4GiwLA5bvKosG3B +iARZ2v5UWqCZQ1tS56yKse/lCIzXQqU9BnYW6wOI2rvFf9meLfd8h96peG6oKscs +fbclLDIf68bBvGBQaD0VYFi/Fk/rxmTQBOCQ3AJZs8O5rIM4gPGE0QGvSZ1h7VRw +3Uyeg4jKXLIeJn2xEmOJgt3auAR2FyKbzHaX9JCoByJZ/eU23akNl9hgt7ePlpXo +74KNYC58auuMUhCq3BQDB+II4ERYMcmFp1N5ZG05Cl6jcaRRHDXz+Ax6DWprRI1+ +RH/Yyae6LmKpeJNwd+vM14aawnNO9h8IAQ+aJ3oYZdRhGyybbin3giJ10hmWveg/ +Pey91Nh9vBCHdDkdPU0s9zE7z/PHT0c5ccZRukxfZfkrlWQ5iqu3V064ku5f4PBy +8UPSkETcjYgDnrdnwqIAO+oVg/SFlfsOzftnwUrvwIcZlXAgtP6MEEAs/38e/JIN +g4VrpdAy7HMGEUsh6Ah6lvGQr+zBnG44XwKfl7e0uCYkrAzUJRGM5vx9iXvFMcMu +jv9EBNNBOU8/Y6MBDzGZhgaoeI27nrUvaveJXjAiDKAQWBLjtQjINZ8I9uaSGOul +8kpbFavE4eS3+KhISrSHe4DuAa3dk9zI+FiPvXY1ZyfQBtNpR+gYFY6VxMbHhY1U +lSLHO2eUIQLdYbRITmV1cm9EZWJpYW4gQXJjaGl2ZSBLZXkgPHBrZy1leHBwc3kt +bWFpbnRhaW5lcnNAbGlzdHMuYWxpb3RoLmRlYmlhbi5vcmc+iEYEEBEIAAYFAk1R +yQYACgkQjRFFY3XAJMgEWwCggx4Gqlcrt76TSMlbU94cESo55AEAoJ3asQEMpe8t +QUX+5aikw3z1AUoCiEoEEBECAAoFAkqf/3cDBQF4AAoJEPd/jbIxRL4PxyMAoKUI +RPWlHCj/+HSFfwhos68wcSwmAKChuC00qutDro+AOo+uuq6YoHXj+ohgBBMRAgAg +BQJKn/8bAhsDBgsJCAcDAgQVAggDBBYCAwECHgECF4AACgkQpdMvASZJpalDggCe +KF9KOgOPdQbFnKXl8KtHory4EEwAnA7jxgorE6kk2QHEXFSF8LzOOH4GiGMEExEC +ACMCGwMGCwkIBwMCBBUCCAMEFgIDAQIeAQIXgAUCSp//RgIZAQAKCRCl0y8BJkml +qekFAKCRyt4+FoCzmBbRUUP3Cr8PzH++IgCgkno4vdjsWdyAey8e0KpITTXMFrmJ +AhwEEAECAAYFAk0jQYEACgkQwHPSKH/7npsFfw/+P8B8hpM3+T1fgboBa4R32deu +n8m6b8vZMXwuo/awQtMpzjem8JGXSUQm8iiX4hDtjq6ZoPrlN8T4jNmviBt/F5jI +Jji/PYmhq+Zn9s++mfx+aF4IJrcHJWFkg/6kJzn4oSdl/YlvKf4VRCcQNtj4xV87 +GsdamnzU17XapLVMbSaVKh+6Af7ZLDerEH+iAq733HsYaTK+1xKmN7EFVXgS7bZ1 +9C4LTzc97bVHSywpT9yIrg9QQs/1kshfVIHDKyhjF6IwzSVbeGAIL3Oqo5zOMkWv +7JlEIkkhTyl+FETxNMTMYjAk+Uei3kRodneq3YBF2uFYSEzrXQgHAyn37geiaMYj +h8wu6a85nG1NS0SdxiZDIePmbvD9vWxFZUWYJ/h9ifsLivWcVXlvHoQ0emd+n2ai +FhAck2xsuyHgnGIZMHww5IkQdu/TMqvbcR6d8Xulh+C4Tq7ppy+oTLADSBKII++p +JQioYydRD529EUJgVlhyH27X6YAk3FuRD3zYZRYS2QECiKXvS665o3JRJ0ZSqNgv +YOom8M0zz6bI9grnUoivMI4o7ISpE4ZwffEd37HVzmraaUHDXRhkulFSf1ImtXoj +V9nNSM5p/+9eP7OioTZhSote6Vj6Ja1SZeRkXZK7BwqPbdO0VsYOb7G//ZiOlqs+ +paRr92G/pwBfj5Dq8EK5Ag0ERDtM9RAIAN0EJqBPvLN0tEin/y4Fe0R4n+E+zNXg +bBsq4WidwyUFy3h/6u86FYvegXwUqVS2OsEs5MwPcCVJOfaEthF7I89QJnP9Nfx7 +V5I9yFB53o9ii38BN7X+9gSjpfwXOvf/wIDfggxX8/wRFel37GRB7TiiABRArBez +s5x+zTXvT++WPhElySj0uY8bjVR6tso+d65K0UesvAa7PPWeRS+3nhqABSFLuTTT +MMbnVXCGesBrYHlFVXClAYrSIOX8Ub/UnuEYs9+hIV7U4jKzRF9WJhIC1cXHPmOh +vleAf/I9h/0KahD7HLYud40pNBo5tW8jSfp2/Q8TIE0xxshd51/xy4MAAwUH+wWn +zsYVk981OKUEXul8JPyPxbw05fOd6gF4MJ3YodO+6dfoyIl3bewk+11KXZQALKaO +1xmkAEO1RqizPeetoadBVkQBp5xPudsVElUTOX0pTYhkUd3iBilsCYKK1/KQ9KzD +I+O/lRsm6L9lc6rV0IgPU00P4BAwR+x8Rw7TJFbuS0miR3lP1NSguz+/kpjxzmGP +LyHJ+LVDYFkk6t0jPXhqFdUY6McUTBDEvavTGlVO062l9APTmmSMVFDsPN/rBes2 +rYhuuT+lDp+gcaS1UoaYCIm9kKOteQBnowX9V74Z+HKEYLtwILaSnNe6/fNSTvyj +g0z+R+sPCY4nHewbVC+ISQQYEQIACQUCRDtM9QIbDAAKCRCl0y8BJkmlqbecAJ9B +UdSKVg9H+fQNyP5sbOjj4RDtdACfXHrRHa2+XjJP0dhpvJ8IfvYnQsU= +=fAJZ +-----END PGP PUBLIC KEY BLOCK----- diff --git a/templateflow/tests/test_api.py b/templateflow/tests/test_api.py index 6043561c..e129e87a 100644 --- a/templateflow/tests/test_api.py +++ b/templateflow/tests/test_api.py @@ -13,7 +13,7 @@ ] mni2009_fbib = """\ -@article{Fonov_2011, +@article{2011, \tdoi = {10.1016/j.neuroimage.2010.07.033}, \turl = {https://doi.org/10.1016%2Fj.neuroimage.2010.07.033}, \tyear = 2011, @@ -24,20 +24,18 @@ \tpages = {313--327}, \tauthor = {Vladimir Fonov and Alan C. Evans and Kelly Botteron and C. Robert \ Almli and Robert C. McKinstry and D. Louis Collins}, -\ttitle = {Unbiased average age-appropriate atlases for pediatric studies}, -\tjournal = {{NeuroImage}} +\ttitle = {Unbiased average age-appropriate atlases for pediatric studies} }""" mni2009_lbib = """\ -@incollection{Collins_1999, +@incollection{1999, \tdoi = {10.1007/3-540-48714-x_16}, \turl = {https://doi.org/10.1007%2F3-540-48714-x_16}, \tyear = 1999, \tpublisher = {Springer Berlin Heidelberg}, \tpages = {210--223}, \tauthor = {D. Louis Collins and Alex P. Zijdenbos and Wim F. C. Baar{\\'{e}} and Alan C. Evans}, -\ttitle = {{ANIMAL}$\\mathplus${INSECT}: Improved Cortical Structure Segmentation}, -\tbooktitle = {Lecture Notes in Computer Science} +\ttitle = {{ANIMAL}$\\mathplus${INSECT}: Improved Cortical Structure Segmentation} }""" fslr_urls = [ @@ -46,7 +44,7 @@ ] fslr_fbib = """\ -@article{Van_Essen_2011, +@article{2011, \tdoi = {10.1093/cercor/bhr291}, \turl = {https://doi.org/10.1093%2Fcercor%2Fbhr291}, \tyear = 2011, @@ -57,8 +55,7 @@ \tpages = {2241--2262}, \tauthor = {D. C. Van Essen and M. F. Glasser and D. L. Dierker and J. Harwell and T. Coalson}, \ttitle = {Parcellations and Hemispheric Asymmetries of Human Cerebral Cortex Analyzed on \ -Surface-Based Atlases}, -\tjournal = {Cerebral Cortex} +Surface-Based Atlases} }""" fslr_lbib = (