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9c3cb38 Sep 19, 2014
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# Project ID: Arabidopsis - Pseudomonas alternative splicing study (SRA: SRP010938; PMID: 24098335)
# The following line(s) allow to specify the contrasts needed for comparative analyses, such as DEG identification. All possible comparisons can be specified with 'CMPset: ALL'.
# <CMP> CMPset1: M1-A1, M1-V1, A1-V1, M6-A6, M6-V6, A6-V6, M12-A12, M12-V12, A12-V12
# <CMP> CMPset2: ALL
FileName SampleName Factor SampleLong Experiment Date
./data/SRR446027_1.fastq M1A M1 Mock.1h.A 1 23-Mar-2012
./data/SRR446028_1.fastq M1B M1 Mock.1h.B 1 23-Mar-2012
./data/SRR446029_1.fastq A1A A1 Avr.1h.A 1 23-Mar-2012
./data/SRR446030_1.fastq A1B A1 Avr.1h.B 1 23-Mar-2012
./data/SRR446031_1.fastq V1A V1 Vir.1h.A 1 23-Mar-2012
./data/SRR446032_1.fastq V1B V1 Vir.1h.B 1 23-Mar-2012
./data/SRR446033_1.fastq M6A M6 Mock.6h.A 1 23-Mar-2012
./data/SRR446034_1.fastq M6B M6 Mock.6h.B 1 23-Mar-2012
./data/SRR446035_1.fastq A6A A6 Avr.6h.A 1 23-Mar-2012
./data/SRR446036_1.fastq A6B A6 Avr.6h.B 1 23-Mar-2012
./data/SRR446037_1.fastq V6A V6 Vir.6h.A 1 23-Mar-2012
./data/SRR446038_1.fastq V6B V6 Vir.6h.B 1 23-Mar-2012
./data/SRR446039_1.fastq M12A M12 Mock.12h.A 1 23-Mar-2012
./data/SRR446040_1.fastq M12B M12 Mock.12h.B 1 23-Mar-2012
./data/SRR446041_1.fastq A12A A12 Avr.12h.A 1 23-Mar-2012
./data/SRR446042_1.fastq A12B A12 Avr.12h.B 1 23-Mar-2012
./data/SRR446043_1.fastq V12A V12 Vir.12h.A 1 23-Mar-2012
./data/SRR446044_1.fastq V12B V12 Vir.12h.B 1 23-Mar-2012