@thehyve

The Hyve

Open source bioinformatics & translational research service company

Pinned repositories

  1. transmart-core

    Core components and documentation of the tranSMART platform. http://transmartfoundation.org

    Groovy 7 9

  2. cbioportal

    Forked from cBioPortal/cbioportal

    cBioPortal topic branches at The Hyve

    2 2

  3. OHDSI-Atlas

    Forked from OHDSI/Atlas

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript 1

  4. RADAR-AndroidApplication

    Forked from RADAR-base/radar-prmt-android

    Application to be run on a Raspberry Pi3 to interact with the wearable devices

    Java

  5. dntp-portal

    Request portal for Dutch pathology labs.

    Java 3 2

  6. glowing-bear

    🐻 A cohort-selection UI (currently using tranSMART REST API v2)

    TypeScript 11 3

  • cBioPortal topic branches at The Hyve

    2 195 Updated Sep 21, 2018
  • React Frontend of cBioPortal 🎉

    JavaScript 49 AGPL-3.0 Updated Sep 20, 2018
  • react-json-to-table

    TypeScript GPL-3.0 Updated Sep 20, 2018
  • PIC-SURE resource configuration files

    SQLPL 3 Updated Sep 19, 2018
  • Python 1 Updated Sep 18, 2018
  • Request portal for Dutch pathology labs.

    Java 3 2 Updated Sep 18, 2018
  • tranSMART is a knowledge management platform that enables scientists to develop and refine research hypotheses by investigating correlations between genetic and phenotypic data, and assessing their analytical results in the context of published literature and other work.

    JavaScript 81 GPL-3.0 Updated Sep 18, 2018
  • Staging app for automatically loading studies into cBioPortal

    Java AGPL-3.0 Updated Sep 18, 2018
  • A centralized location for storing curated data ready for inclusion in cBioPortal.

    16 Updated Sep 17, 2018
  • IRCT

    Forked from hms-dbmi/IRCT

    Merged IRCT Repository

    Java 1 7 Updated Sep 17, 2018
  • 🐻 A cohort-selection UI (currently using tranSMART REST API v2)

    TypeScript 11 3 MPL-2.0 Updated Sep 17, 2018
  • Core components and documentation of the tranSMART platform. http://transmartfoundation.org

    Groovy 7 9 Updated Sep 14, 2018
  • A context to create cBioPortal docker images

    Dockerfile 3 9 Updated Sep 14, 2018
  • Github pages for Glowing Bear website

    HTML Updated Sep 13, 2018
  • python client for transmart rest api

    Python 5 2 GPL-3.0 Updated Sep 13, 2018
  • Puppet module for Glowing Bear

    Puppet 1 GPL-3.0 Updated Sep 12, 2018
  • A CKAN extension for managing permissions

    Python AGPL-3.0 Updated Sep 11, 2018
  • A data showcase for displaying a summary of data in TranSMART.

    Groovy 2 AGPL-3.0 Updated Sep 10, 2018
  • tranSMART Arborist ETL toolkit

    Python 5 2 LGPL-3.0 Updated Sep 5, 2018
  • Basic phone sensor plugin for RADAR passive remote monitoring app

    Java 2 Apache-2.0 Updated Sep 4, 2018
  • Base android functionality for the RADAR passive application plugins

    Java 3 Apache-2.0 Updated Sep 4, 2018
  • Python Updated Aug 29, 2018
  • PostgreSQL extension providing a bitcount function.

    C++ 6 1 MIT Updated Aug 27, 2018
  • A Docker image for Livy, the REST Spark Server over Hail.is

    Dockerfile 12 MIT Updated Aug 22, 2018
  • Puppet module for the data showcase application

    Puppet GPL-3.0 Updated Aug 21, 2018
  • Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a OMOP CDM v4 database

    HTML 1 59 Updated Aug 20, 2018
  • i2b2 server source code

    Java 20 Updated Aug 17, 2018
  • Puppet module for installing i2b2.

    Puppet Updated Aug 6, 2018
  • QSP dev portal based on AWS API Gateway

    JavaScript Apache-2.0 Updated Aug 3, 2018
  • Simple command line password encoder tool

    Java Updated Jul 31, 2018