@thehyve

The Hyve

Open source bioinformatics & translational research service company

Pinned repositories

  1. cbioportal

    Forked from cBioPortal/cbioportal

    cBioPortal topic branches at The Hyve

    2 1

  2. OHDSI-Atlas

    Forked from OHDSI/Atlas

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript

  3. RADAR-AndroidApplication

    Forked from RADAR-CNS/RADAR-AndroidApplication

    Application to be run on a Raspberry Pi3 to interact with the wearable devices

    Java

  4. transmart-core

    Core components and documentation of the tranSMART platform. http://transmartfoundation.org

    JavaScript

  5. glowing-bear

    transMART UI

    TypeScript 3

  6. dntp-portal

    Request portal for Dutch pathology labs.

    Java 3 2

  • Core components and documentation of the tranSMART platform. http://transmartfoundation.org

    JavaScript Updated Apr 21, 2017
  • Request portal for Dutch pathology labs.

    Java 3 2 Updated Apr 21, 2017
  • BBMRI Podium Request Portal

    Java 4 Updated Apr 21, 2017
  • transMART UI

    TypeScript 3 Updated Apr 20, 2017
  • tranSMART Arborist ETL toolkit

    Python 1 Updated Apr 20, 2017
  • cBioPortal topic branches at The Hyve

    2 140 Updated Apr 19, 2017
  • Context to create cBioPortal docker images

    1 5 Updated Apr 19, 2017
  • Simple SAS7BDAT to CSV conversion tool based on the Parso library.

    Java 1 1 Updated Apr 18, 2017
  • A centralized location for storing curated data ready for inclusion in cBioPortal.

    5 Updated Apr 14, 2017
  • Base android functionality for the RADAR passive application plugins

    Java 1 Updated Apr 13, 2017
  • PLSQL Updated Apr 13, 2017
  • An R module for interacting with tranSMART's RESTful API

    R 3 12 Updated Apr 12, 2017
  • tranSMART pipeline alternative to ETL, using Spring Batch

    Groovy 8 10 Updated Apr 12, 2017
  • Application to be run on a Raspberry Pi3 to interact with the wearable devices

    Java 4 Updated Apr 11, 2017
  • Kafka backend for processing device data

    Java 2 Updated Apr 10, 2017
  • Python Updated Apr 9, 2017
  • Boris as a Service: TranSMART Arborist without the hassle.

    JavaScript Updated Apr 2, 2017
  • Data science with tranSMART REST API in Python and R. 2015 tranSMART Foundation Annual Meeting – Amsterdam. http://lanyrd.com/2015/transmart-foundation-annual-meeting/sdtffh/

    Jupyter Notebook 2 Updated Mar 28, 2017
  • iViz

    Forked from cBioPortal/iViz

    cBioPortal Study View

    JavaScript 6 Updated Mar 3, 2017
  • Grails plugin for importing tab delimited, Excel 97/2003/2007 and CSV files

    Groovy 3 2 Updated Feb 27, 2017
  • Generic Study Capture Framework

    JavaScript 5 8 Updated Feb 27, 2017
  • TranSMART FAIR data point

    Python Updated Feb 18, 2017
  • OAuth + JupyterHub Authenticator = OAuthenticator

    Python 79 Updated Feb 17, 2017
  • Java 1 Updated Feb 16, 2017
  • Java 2 Updated Feb 10, 2017
  • Connector to link tranSMART to an XNAT server

    Groovy 3 Updated Feb 5, 2017
  • WhiteRabbit is a small application that can be used to analyse the structure and contents of a database as preparation for designing an ETL. It comes with RabbitInAHat, an application for interactive design of an ETL to the OMOP Common Data Model with the help of the the scan report generated by White Rabbit.

    Java 20 Updated Jan 27, 2017
  • jstat

    Forked from jstat/jstat

    JavaScript Statistical Library

    JavaScript 163 Updated Jan 26, 2017
  • Boilerplate code for tranSMART UI

    JavaScript 3 3 Updated Jan 23, 2017
  • A full text and metadata extractor for CKAN

    Python 3 Updated Jan 19, 2017