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Currently it’s almost a MVP.
What do you people think (especially @mbuttner)? Possible improvements:
I guess at least the heuristic and the docs have to go in!
I also don’t know if relying on the previous
I can help you with the docs, if you like!
Lastly, I'd find it important that you can apply kBET group-wise. For example, you may add a
How are things going?
I think all of this looks fine except for two things:
PS: Why are there no contributions by you, @mbuttner? After all, it's your method and paper.
Some(most?) batch correction methods produce outputs in a lower dimensional space (like CCA or scVI), which are more likely to be stored in
Another idea is to keep multiple kNN graphs in