A collection of scripts related to biochemistry.
NMR (Nuclear Magnetic Resonance) collection
TODO
PDB (Protein Data Bank) collection
Interface residues analysis (PyMOL integration)
To execute the scripts,
- Download a ZIP of this repository
cd PDB/
pymol -cqx fetch_and_store.py
./generate_config.py
./list.py
./list_spiced.py
./resn_statistics.py
./PDB/green_statistics.py ./PDB/test/green_fastas.txt ./PDB/test/green_IR.txt
Useful resources
Install:
- http://pymolwiki.org/index.php/Main_Page
- http://www.pymolwiki.org/index.php/MAC_Install
- http://www.pymolwiki.org/index.php/Linux_Install
- http://www.pymolwiki.org/index.php/Launching_From_a_Script
Script writing: