Installing adegenet devel

Thibaut Jombart edited this page Aug 27, 2015 · 6 revisions

Basic procedure

You will need the package devtools to be able to install the devel version of adegenet. To install devtools:

install.packages("devtools")

To install adegenet devel:

library(devtools)
install_github("thibautjombart/adegenet")
library("adegenet")

On windows

Note that on Windows, you will need Rtools installed for devtools to work. Rtools is not a R package, but a set of tools for building/compiling R packages. You can download it from: https://cran.r-project.org/bin/windows/Rtools/

Once installed, start R, load devtools, and run find_rtools() to check that Rtools has been successfully installed and detected. You should get:

library(devtools)
find_rtools()
[1] TRUE

Then, you should be able to install adegenet as shown above, i.e.:

install_github("thibautjombart/adegenet")
library("adegenet")
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