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1. popgen popgen Public

   A collection of scripts I wrote when doing population genetics: calculate GC content, perform the McDonald-Kreitman test, calculate Tajima's D, convert VCF files to FASTA files using a reference ge…

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2. inter-island-mating-behavior-genetics-Laupala inter-island-mating-behavior-genetics-Laupala Public

   Scripts for manuscript https://doi.org/10.1101/250852 (preprint, in review)

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3. statistics statistics Public

   a collection of evolutionary statistical analyses. a phylogenetically corrected generalized least squares for multivariate response variables as in Blankers et al. 2012. J. Evol. Biol, a power, sam…

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4. genomic-architecture-Laupala genomic-architecture-Laupala Public

   Scripts for manuscript https://doi.org/10.1101/160952 (preprint, in review)

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5. thomasblankers.github.io thomasblankers.github.io Public

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6. summarize_structure_barplot summarize_structure_barplot Public

   This R function takes the output (deme assignment, i.e. Q matrix) from structure, averages over iterations, and creates a barplot of the averages across iterations

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