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1. HLAVJ HLAVJ Public

   Runs Kaplan-Meier Analyses on data with HLA subtype, VJ Segments, and clinical data. (Designed for MMRF-CoMMpass data)

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2. ADSP-dl-process ADSP-dl-process Public

   Scripts to download exome slices from ADSP (Alzheimer's Disease Sequencing Project) (Requires bucket connection to ADSP site) + processing for t-test to compare physchem

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3. ADSPHLA ADSPHLA Public

   Using case and control data from ADSP as well as HLA alleles, processes various statistical tests.

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4. CRC_VDJ CRC_VDJ Public

   Script showing how reads were processed, and the statistical tests used for count and physicochemical parameters comparisons.

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5. BL_VDJ BL_VDJ Public

   Updated HLA-VDJ code to identify survival for each factor and both. Made specifically for CGCI-BLGSP Burkitt Lymphoma dataset.

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