DESCRIPTION

Package: masscleaner
Type: Package
Title: Data cleaning for LC-MS based metabolomics data
Version: 1.0.12
Date: 2023-09-03
Authors@R: c(person(given = "Xiaotao",
           family = "Shen",
           role = c("aut", "cre"),
           email = "shenxt1990@outlook.com",
           comment = c(ORCID = "0000-0002-9608-9964"))
           )
Description: This package is uesd to do the data cleaning for LC-MS metabolomics
             data. From missing value processing to data normalization. 
             The functions in this package only support mass_dataset class from
             massdataset package.
LazyData: true
Depends: R (>= 4.1)
Imports:
    BiocParallel,
    cli,
    crayon,
    dplyr,
    ggplot2,
    graphics,
    grDevices,
    pcaMethods,
    impute,
    missForest,
    magrittr,
    purrr,
    e1071,
    methods,
    utils,
    stats,
    tibble,
    masstools,
    rstudioapi,
    robust,
    massdataset
License: GPL-2 | file LICENSE
URL: https://github.com/tidymass/masscleaner
BugReports: https://github.com/tidymass/masscleaner/issues
RoxygenNote: 7.2.3
Suggests: 
    knitr,
    rmarkdown,
    BiocStyle,
    RUnit,
    testthat (>= 3.0.0),
    BiocGenerics
VignetteBuilder: knitr
Note:
biocViews: Metabolomics, MassSpectrometry
Encoding: UTF-8
Remotes: 
    gitlab::tidymass/masstools,
    gitlab::tidymass/massdataset
Config/testthat/edition: 3