Closed
Description
col_types_defuse = readr::cols_only(
"cluster_id" = readr::col_character(),
"splitr_sequence" = readr::col_character(),
"splitr_count" = readr::col_integer(),
"gene1" = readr::col_character(),
"gene2" = readr::col_character(),
"gene_chromosome1" = readr::col_character(),
"gene_chromosome2" = readr::col_character(),
"gene_name1" = readr::col_character(),
"gene_name2" = readr::col_character(),
"gene_strand1" = readr::col_character(),
"gene_strand2" = readr::col_character(),
"genomic_break_pos1" = readr::col_integer(),
"genomic_break_pos2" = readr::col_integer(),
"span_count" = readr::col_integer(),
"orf" = readr::col_character(),
"probability" = readr::col_number()
)
readr::read_tsv(
file = "defuse_833ke_results.filtered.tsv",
col_types = col_types_defuse
)
This leads to a lot of warning messages:
Warning messages:
1: In read_tokens_(data, tokenizer, col_specs, col_names, ... :
length of NULL cannot be changed
2: In read_tokens_(data, tokenizer, col_specs, col_names, ... :
length of NULL cannot be changed
...
Is there something I'm doing wrong? I'm doing this from the rocker/rstudio:devel
docker image.