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Scripts for the chromosome-level European grayling genome assembly
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Chr_sturcture_plots.final.R
RADstats_final.R
README.md
barcodesplitter5.3.pl
best_multi_blast_score_parser.pl
classifyGoodTEHits.R
contig_statistics.pl
salmonize_final.R

README.md

graylinggenome

Scripts for the chromosome-level European grayling genome assembly:

  • RADstats_final.R was used to parse the RAD genotype files

  • Perl script barcodesplitter5.3.pl was used to separate the reads belonging to different individuals in the RAD data set.

  • Chr_sturcture_plots.final.R is an R script for plotting and analysing the genome assembly data.

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