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Pinned repositories

  1. dieterich-lab/circtools

    circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line driven software.

    Python 3 4

  2. dieterich-lab/DCC

    DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies a series of filters and integrates data across replicate set…

    Python 16 9

  3. dieterich-lab/FUCHS

    FUCHS - FUll circle CHaracterization from rna-Seq

    Python 5

  4. dieterich-lab/CircTest

    CircRNA testing and ploting R package

    R 3 7

  5. dieterich-lab/bioinfo-scripts

    Assorted scripts in Perl, Bash, R and whatsoever directly from a bioinformaticians scripts/ folder

    Shell 1

  6. dieterich-lab/slurm-tools

    A collection of helper scripts for everyday use of SLURM


720 contributions in the last year

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Mon Wed Fri
Activity overview
Contributed to dieterich-lab/circtools, dieterich-lab/FUCHS, dieterich-lab/DCC and 5 other repositories

Contribution activity

September 2018

Created an issue in dieterich-lab/circtools that received 1 comment

Fix broken pysam dependency of HTseq for DCC

DCC requires HTseq that does not install with the most recent pysam version. We have to manually specify the pysam version to be 0.13.0.

1 comment
5 contributions in private repositories Sep 6 – Sep 19

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