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@dieterich-lab
tjakobi/README.md

Hi there 👋

I'm a bioinformatician and postdoctoral fellow working on circular RNAs

  • 🏢 I'm currently working at University Hospital Heidelberg, Section of Bioinformatics and Systems Cardiology
  • ⚙️ I use daily: .py, .sh, .pl, .R, .svg, .fastq,.fasta, .bam
  • 🌍 I'm mostly active within the bioinformatics community
  • 💅 Working on: Circtools, DCC, Bioinformatics scripts, etc…
  • 💬 Ping me about bioinformatics, circular RNAs, HPC, systems cardiology, computational RNA biology
  • 📫 Reach me: twitter.com/TobiasJakobi
  • ⚡️ Fun fact: I'm enjoying landscape and nature photography

Pinned

  1. circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line driven software.

    Python 12 11

  2. DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies a series of filters and integrates data across replicate set…

    Python 24 17

  3. FUCHS - FUll circle CHaracterization from rna-Seq

    Python 1 6

  4. CircRNA testing and ploting R package

    R 7 8

  5. Assorted scripts in Perl, Bash, R and whatsoever directly from a bioinformaticians scripts/ folder

    Shell 1 3

  6. A collection of helper scripts for everyday use of SLURM

    Shell 1

422 contributions in the last year

Sep Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Mon Wed Fri
Activity overview
Contributed to dieterich-lab/circtools, dieterich-lab/bioinfo-scripts, dieterich-lab/DCC and 5 other repositories
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Contribution activity

September 2020

16 contributions in private repositories Sep 2 – Sep 23

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