Permalink
Browse files

update links to use https to i can close #7

  • Loading branch information...
tlnagy committed May 2, 2018
1 parent f85ac84 commit dc3b21c628604d7756a8c02c76ab26d2199f9156
@@ -3,7 +3,7 @@
Code for generating my personal blog. This blog would not be possible
without several awesome open source projects including:
- [Jekyll](http://jekyllrb.com) - static site generator
- [Jekyll](https://jekyllrb.com) - static site generator
- [Pandoc](http://pandoc.org) - the markup conversion swiss-army knife
(indispensable)
- [jekyll-pandoc](https://github.com/mfenner/jekyll-pandoc) - to make the previous two play nice
@@ -14,7 +14,7 @@ without several awesome open source projects including:
## Building
See my post [here](http://tamasnagy.com/blog/building-jekyll-site-debian/)
See my post [here](https://tamasnagy.com/blog/building-jekyll-site-debian/)
to get it up and running on Debian. Other POSIX compliant systems should
be similar.
@@ -5,7 +5,7 @@ email: your-email@domain.com
description: > # this means to ignore newlines until "baseurl"
Bioinformatics graduate student at UCSF. Interested in systems biology, image analysis, math, mountains, photography, and more
baseurl: "" # the subpath of your site, e.g. /blog/
url: "http://www.tamasnagy.com" # the base hostname & protocol for your site
url: "https://tamasnagy.com" # the base hostname & protocol for your site
twitter_username: tlngy
github_user: tlnagy
github_repo: tnsite
@@ -2,10 +2,10 @@
<div class="wrapper">
<p class="rss-subscribe">Subscribe <a href="{{ "/feed.xml" | prepend: site.baseurl }}">via RSS</a></p>
<p>Powered by <a href="http://jekyllrb.com">Jekyll</a>. Theme based on <a href="http://daryl.andrewlee.name">Daryl</a>.</p>
<a rel="license" href="http://creativecommons.org/licenses/by/4.0/"><img alt="Creative Commons License" style="border-width:0" src="https://i.creativecommons.org/l/by/4.0/80x15.png" /></a><br /><span xmlns:dct="http://purl.org/dc/terms/" property="dct:title">All content on this website</span> by <a xmlns:cc="http://creativecommons.org/ns#" href="http://www.tamasnagy.com" property="cc:attributionName" rel="cc:attributionURL">Tamas Nagy</a> is licensed under a <a rel="license" href="http://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution 4.0 International License</a>, unless otherwise noted. The <a href="http://github.com/{{ site.github_user }}/{{ site.github_repo}}/">code</a> itself is MIT licensed.
<a rel="license" href="http://creativecommons.org/licenses/by/4.0/"><img alt="Creative Commons License" style="border-width:0" src="https://i.creativecommons.org/l/by/4.0/80x15.png" /></a><br /><span xmlns:dct="http://purl.org/dc/terms/" property="dct:title">All content on this website</span> by <a xmlns:cc="http://creativecommons.org/ns#" href="https://tamasnagy.com" property="cc:attributionName" rel="cc:attributionURL">Tamas Nagy</a> is licensed under a <a rel="license" href="http://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution 4.0 International License</a>, unless otherwise noted. The <a href="https://github.com/{{ site.github_user }}/{{ site.github_repo}}/">code</a> itself is MIT licensed.
</div> <!-- .wrapper -->
@@ -15,7 +15,7 @@ <h2 class="site-tagline">{{ site.tagline }}</h2>
<a href="{{ site.baseurl }}/reading/">reading</a>
<a href="{{ site.baseurl }}/about/">about</a>
<div class="nav-source">
<i class="fa fa-github gh-icon"></i><a href="http://github.com/{{ site.github_user }}/{{ site.github_repo }}/blob/master/{{ page.path }}">source</a>
<i class="fa fa-github gh-icon"></i><a href="https://github.com/{{ site.github_user }}/{{ site.github_repo }}/blob/master/{{ page.path }}">source</a>
</div>
</nav>
@@ -25,10 +25,10 @@ where $N_db$ is the number of set comparisons made while searching the database.
The full presentation can be found below.
<div class="bigspacer"></div>
<center><iframe src="http://www.slideshare.net/slideshow/embed_code/33171714" width="476" height="400" frameborder="0" marginwidth="0" marginheight="0" scrolling="no"></iframe></center>
<center><iframe src="https://www.slideshare.net/slideshow/embed_code/33171714" width="476" height="400" frameborder="0" marginwidth="0" marginheight="0" scrolling="no"></iframe></center>
<div class="bigspacer"></div>
<script type="text/javascript"
src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
src="https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
## References
@@ -187,6 +187,6 @@ Voila, we have Figure 3:
data is negative.](/assets/images/precision-recall.svg)
<script type="text/javascript"
src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
src="https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
## References
@@ -31,6 +31,6 @@ I implemented the code using Python 3, NumPy, SciPy, and Matplotlib and it is av
![However, they start to coalesce into a grid of vortices](/assets/images/2017-09-07-microtubule-vortices/mt_vortices.gif)
<script type="text/javascript"
src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
src="https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
## References
2 cv.md
@@ -13,7 +13,7 @@ San Francisco, CA 94158-9001
Email: tamas [at] tamasnagy.com\
Twitter: [\@tlngy](https://twitter.com/tlngy)\
Website: [http://www.tamasnagy.com](www.tamasnagy.com)
Website: <https://tamasnagy.com>

0 comments on commit dc3b21c

Please sign in to comment.