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1. dellytools/delly dellytools/delly Public

   DELLY2: Structural variant discovery by integrated paired-end and split-read analysis

   C++ 536 138

2. alfred alfred Public

   BAM Statistics, Feature Counting and Annotation

   C++ 156 12

3. wally wally Public

   Wally: Visualization of aligned sequencing reads and contigs

   C++ 127 6

4. gear-genomics/tracy gear-genomics/tracy Public

   Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files

   C++ 124 24

5. vc vc Public

   A tutorial on structural variant calling for short read sequencing data

   R 45 2

6. sv sv Public

   Structural variant calling tutorial using long-reads.

   R 11 2