dspinellis / unix-history-repo

3.6k

Continuous Unix commit history from 1970 until today

unix freebsd bell-labs history evolution berkeley snapshot

Assembly Updated Nov 30, 2018

victorqribeiro / invaderz

474

Space invaders, but the invaders evolve with genetic algorithm

genetic-algorithm space-invaders game javascript evolution evolutionary-algorithm

JavaScript Updated Feb 2, 2019

Revolutionary-Games / Thrive

427

The main repository for the development of the evolution game Thrive.

thrive ogre game simulation evolution c-plus-plus strategy biology science sandbox

Good first issues

Fix nitrogenase offset in editor

good first issue Bug

#775 opened 18 days ago by NickTheNick

5

Drag force shouldn't affect ATP use

easy good first issue AngelScript

#769 opened about 1 month ago by hhyyrylainen

3

The player should be the only initial species

easy AngelScript

#761 opened about 1 month ago by hhyyrylainen

8

C++ Updated May 4, 2019

dspinellis / unix-history-make

229

Code and data to create a git repository representing the Unix source code history

unix bell-labs history evolution

Roff Updated Dec 24, 2018

colgreen / sharpneat

198

SharpNEAT - Evolution of Neural Networks. A C# .NET Framework.

ai evolutionary-computation reinforcement-learning neural-network neat sharpneat evolution evolutionary-algorithm neuroevolution neural-networks

C# Updated Apr 27, 2019

thopit / Creatures

189

Evolution simulator

evolution evolution-simulator

Java Updated Mar 17, 2018

aim42 / aim42

128

public repository for the "architecture improvement method reference"

improvement evolution maintenance architecture method remedies

CSS Updated Apr 1, 2019

Evolution-App / Backend

122

Backend is responsible to provide data to EVOlution App - iOS

swift-evolution swift backend server-side-swift kitura evolution-app ibm bff-component bff evolution macos xcode toolchain ibm-bluemix proposals

Swift Updated May 31, 2018

MichaelJWelsh / bot-evolution

120

An interesting display of evolution through neural networks and a genetic algorithm

evolution genetic-algorithm neural-network visual python

Python Updated May 1, 2017

raivivek / awesome-biology

106

Curated list of resources for Biology.

biology awesome-list bioinformatics books evolution systems-biology science

Updated Apr 4, 2019

CompEvol / beast2

103

Bayesian Evolutionary Analysis by Sampling Trees

phylogenetics bayesian-inference mcmc beast java evolution

Good first issues

find citations of each package

documentation enhancement

#781 opened 12 months ago by walterxie

4

Knowledge-based package manager

documentation enhancement

#770 opened about 1 year ago by walterxie

10

Tutorial for ascertainment bias, ideally including BEAUti support

documentation enhancement

#721 opened almost 2 years ago by walterxie

Java Updated Apr 15, 2019

beast-dev / beast-mcmc

79

Bayesian Evolutionary Analysis Sampling Trees

beast java bayesian-analysis mcmc phylogenetics evolution

Java Updated May 4, 2019

stephaneguindon / phyml

55

PhyML -- Phylogenetic estimation using (Maximum) Likelihood

mcmc phylogenetics evolution

C Updated May 4, 2019

tanghaibao / quota-alignment

40

Guided synteny alignment between duplicated genomes (within specified quota constraint)

synteny genomics comparative-genomics evolution

Python Updated Sep 5, 2017

pampersrocker / EvoNet

39

Evolution Simulation in XNA Refresh

simulation evolution-simulator tilemap xna evolution neural-network

C# Updated Feb 7, 2017

evolution-ui / evolution-ui

30

Cutting Edge UI Components for Modern Developers

evolution evolution-ui css sass javascript ui-components ui-toolkit

CSS Updated Jun 7, 2017

SpeciesFileGroup / taxonworks

27

Workbench for biodiversity informatics.

species biodiversity-informatics ruby taxonomy biodiversity describe life evolution nomenclature collections

Ruby Updated May 4, 2019

petercollingridge / Cell-Simulation

27

Python simulation of a single-celled organism

python python27 biology evolution

Python Updated Oct 4, 2015

traitecoevo / plant

26

Trait-Driven Models of Ecology and Evolution 🌲

ecology evolution demography plant-physiology c-plus-plus r trait dynamic simulation science-research forests

C++ Updated Mar 20, 2018

smartdevicelink / sdl_evolution

26

Tracking and proposing changes to SDL's public APIs.

sdl sdl-evolution proposal evolution smartdevicelink

XSLT Updated May 3, 2019

Lexaron / Cellsim-2

26

Simulating complete lives of different cellular animals and plants. Evolution, inheritance, predation and more.

java javafx simulation zero-player-game cellular-automata evolution emergent-behavior cellsim 2d-graphics cellular-automatons cellularautomata animal-behavior mutations breeds

Java Updated Nov 5, 2018

debbiemarkslab / EVzoom

25

Visually explore covariation in protein families

evolution protein-sequences protein-interaction undirected-graphs amino-acids d3js

JavaScript Updated Dec 5, 2018

sestaton / Transposome

22

A toolkit for annotation of transposable element families from unassembled sequence reads

transposable-elements genome-annotation evolution

Perl Updated Apr 25, 2019

tlemo / darwin

18

Evolutionary Algorithms Framework

ai ml neuroevolution evolutionary-algorithms evolution genetic-algorithms genetic-programming

C++ Updated Apr 17, 2019

lavabit / tutorials

17

Configuration tutorials for a variety of mail user agents.

tutorial email-client evolution geary gmail k9mail kmail mailbird mailpile mutt sylpheed thebat thunderbird windows-mail

Updated Aug 20, 2017

briandconnelly / seeds

17

Stochastic Cellular Artificial Life Simulator

evolution simulation-framework python artificial-life cellular-automata

Python Updated Dec 31, 2017

flxsosa / DeepHyperNEAT

16

A public python implementation of the DeepHyperNEAT system for evolving neural networks. Developed by Felix Sosa and …

neuroevolution evolutionary-computation evolutuonary-algorithms artificial-intelligence neural-networks evolution genetic-algorithm brain neat hyperneat deephyperneat

Python Updated Oct 29, 2018

chasewnelson / SNPGenie

15

Perl software for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data

snp-report fasta-sequences next-generation-sequencing dnds-estimation dnds nucleotide diversity-measurement nucleotide-diversity sequence-analysis population-genetics evolution molecular-evolution evolutionary-parameters substitution-rate nei-gojobori natural-selection vcf vcf-files perl

Perl Updated Apr 24, 2019

rvosa / bio-phylo

15

Bio::Phylo - Phyloinformatic analysis using Perl

computational-biology bioinformatics phylogenetics evolution perl toolkit

Perl Updated Dec 7, 2018

cmzmasek / archaeopteryx-js

15

Archaeopteryx.js is a software tool for the visualization and analysis of highly annotated phylogenetic trees.

archaeopteryx visualization javascript phylogenetics evolution phylogenetic-trees analysis archaeopteryx-js

JavaScript Updated Apr 16, 2019

evolution

Repositories 323

Good first issues

Good first issues