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interproscan

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THIS PROJECT IS NO LONGER SUPPORTED See Brivez Instead!! https://github.com/furacca/brivez/ - ------------------------------------------ - Cuterle is a bioinformatic tool which return an output file containing every domain annotated by InterProScan via Pfam or SMART analysis from the list of protein submitted.

  • Updated Jul 6, 2022
  • Python

This repository contains a datascience based faster implementation of the domain predictions from the interpro scan and it will give you a complete domains information, coordinates and other associative information. I used a mapping dataframe approach to make it faster rather than looping it over and over.

  • Updated Mar 29, 2024
  • Python

This repository contains a function which will prepare the domain graphs analysis, if you will specify a domain or an interpro, it will give you all the parent and the child graphs for the directed and undirected graphs modelling

  • Updated Mar 29, 2024
  • Python

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