Tools for computation on batch systems
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Updated
Jan 9, 2024 - R
Tools for computation on batch systems
🚀 R package future.batchtools: A Future API for Parallel and Distributed Processing using batchtools
slurmR: A Lightweight Wrapper for Slurm
R functions for project setup, data cleaning, machine learning, SuperLearner, parallelization, and targeted learning.
🚀 R package: future.BatchJobs: A Future API for Parallel and Distributed Processing using BatchJobs [Intentionally archived on CRAN on 2021-01-08]
SCAS dashboard: A tool to intuitively and interactively analyze Slurm cluster usage
Workshop on HPC with Slurm, R, and the slurmR package
RNA-seq alignment and analysis pipeline
🌊 16S rRNA microbiome data analysis workflow using DADA2 and R on a high performance cluster using SLURM
Repo to demonstrate how to launch parallelized array job in Slurm
Testing parallel file creation using SLURM
R package for talking to the HPC cluster at the University of Cologne
Scripts to Install R packages on the NeSI Pan Cluster
Convert Mass Spectrometry Files using msconvert, singularity and SLURM
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